#! Run from base dir with

.guix-shell -- guile -L . -s ./scripts/precompute/precompute-hits.scm

!#

(use-modules (dbi dbi)
             (gn db mysql)
             (gn data strains)
             (rnrs base)
             (ice-9 match)
             )

;; potentially you want to test connection with mysql client:
;;
;;    mysql -uwebqtlout -pwebqtlout -A -h 127.0.0.1 -P 3306 db_webqtl -e "show tables;"
;;

#!
(db-query "SELECT * FROM ProbeSetXRef LIMIT 3")
(db-check)
(let [(row (db-get-row))]
  (display row)
  )
!#

(call-with-db
 (lambda (db)
   (begin
     (dbi-query db "SELECT * FROM ProbeSetXRef LIMIT 3")
     (let [(row (get-row db))]
       (display row)
       )
     (newline)
     (dbi-query db "SELECT * FROM ProbeSetXRef LIMIT 3")
     (let [(row (get-row db))]
       (display row)
       )
     (newline)
     (dbi-query db "SELECT StrainId,Strain.Name FROM Strain, StrainXRef WHERE StrainXRef.StrainId = Strain.Id AND StrainXRef.InbredSetId = 1 AND Used_for_mapping='Y' ORDER BY StrainId;")
     (let [(row (get-row db))]
       (display row)
       )
     (let [(result (get-rows-apply db (lambda (r) `(,(assoc-ref r "StrainId") . ,(assoc-ref r "Name"))) '()))]
       (display (car result)))

     (newline)
     (display (strain-names))
                                        ; (display (car ids))
     (newline)
                                        ; (display (assoc 5 ids))
     (newline)
     (newline)
     (dbi-query db "SELECT * FROM ProbeSetXRef LIMIT 3")
     (let [(row (get-row db))]
       (display row)
       )
     (db-check2 db)
     (newline)
)))