#! Run from base dir with

.guix-shell -- guile -L . -s ./scripts/precompute/precompute-hits.scm

!#

(use-modules (dbi dbi)
             (gn db mysql)
             (gn data strains)
             (rnrs base)
             (ice-9 match)
             )

;; potentially you want to test connection with mysql client:
;;
;;    mysql -uwebqtlout -pwebqtlout -A -h 127.0.0.1 -P 3306 db_webqtl -e "show tables;"
;;

(call-with-db
 (lambda (db)
   (begin
     ;(newline)
     ; (dbi-query db "SELECT StrainId,Strain.Name FROM Strain, StrainXRef WHERE StrainXRef.StrainId = Strain.Id AND StrainXRef.InbredSetId = 1 AND Used_for_mapping='Y' ORDER BY StrainId;")
     ; (let [(row (get-row db))]
     ;  (display row)
     ;  )
     ;(let [(result (get-rows-apply db (lambda (r) `(,(assoc-ref r "StrainId") . ,(assoc-ref r "Name"))) '()))]
     ;  (display (car result)))

     ;(newline)
     (define bxd-strains (bxd-strain-id-names #:map? #t))
     (display (assoc 64728 bxd-strains))
     (newline)
     ;(newline)
     ;(dbi-query db "SELECT * FROM ProbeSetXRef LIMIT 3")
     ;(let [(row (get-row db))]
     ;  (display row)
     ;  )
     ;(db-check2 db)
     ;(newline)
     ;; get first dataset for precompute
     (dbi-query db "select ProbeSetId, Locus, DataId from ProbeSetXRef where Locus_old is NULL LIMIT 1")
     (display (get-row db))
     (newline)
)))