From b1db013cc01c94e27edf982be9b027a2b0bb9712 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Sat, 18 Nov 2023 12:33:22 +0100 Subject: Get first BXD dataset for precompute --- gn/data/strains.scm | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) (limited to 'gn/data') diff --git a/gn/data/strains.scm b/gn/data/strains.scm index 241ecda..39fe71e 100644 --- a/gn/data/strains.scm +++ b/gn/data/strains.scm @@ -7,8 +7,9 @@ #:use-module (ice-9 string-fun) ;; #:use-module (gn db sparql) #:use-module (dbi dbi) - #:use-module (gn db mysql) #:use-module (gn data group) + #:use-module (gn db mysql) + #:use-module (gn util convert) #:use-module (web gn-uri) #:export ( @@ -24,7 +25,7 @@ map? will say whether the strains/individuals are used for mapping. " (call-with-db (lambda (db) - (dbi-query db (string-append "SELECT StrainId,Strain.Name FROM Strain, StrainXRef WHERE StrainXRef.StrainId = Strain.Id AND StrainXRef.InbredSetId = " (format #f "~d" inbred-set) + (dbi-query db (string-append "SELECT StrainId,Strain.Name FROM Strain, StrainXRef WHERE StrainXRef.StrainId = Strain.Id AND StrainXRef.InbredSetId = " (int-to-string inbred-set) (if map? " AND Used_for_mapping='Y'" "") -- cgit v1.2.3