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authorPjotr Prins2023-11-19 17:14:15 +0100
committerPjotr Prins2023-11-19 17:14:15 +0100
commitf65cada4f70d7449f38f1fef5164d7c52283a0e9 (patch)
tree2323a63a44737b5f02cdb7a3044dabc9dc1cc564 /gn
parentcd868747703585661efac3b85a423b6dae9b71c2 (diff)
downloadgn-guile-f65cada4f70d7449f38f1fef5164d7c52283a0e9.tar.gz
Iterating through hits
Diffstat (limited to 'gn')
-rw-r--r--gn/data/dataset.scm23
-rw-r--r--gn/data/hits.scm2
2 files changed, 24 insertions, 1 deletions
diff --git a/gn/data/dataset.scm b/gn/data/dataset.scm
new file mode 100644
index 0000000..5e81d1e
--- /dev/null
+++ b/gn/data/dataset.scm
@@ -0,0 +1,23 @@
+(define-module (gn data dataset)
+  #:use-module (json)
+  #:use-module (ice-9 match)
+  #:use-module (ice-9 format)
+  #:use-module (ice-9 iconv)
+  #:use-module (ice-9 receive)
+  #:use-module (ice-9 string-fun)
+  ;; #:use-module (gn db sparql)
+  #:use-module (dbi dbi)
+  #:use-module (gn db mysql)
+  #:use-module (gn data group)
+  #:use-module (gn util convert)
+  #:use-module (web gn-uri)
+
+  #:export (
+            dataset-name
+            ))
+
+(define (dataset-name db probesetfreeze-id)
+  (dbi-query db
+             (string-append
+              "select Name2 from ProbeSetFreeze where Id=" (int-to-string probesetfreeze-id) " limit 1;"))
+  (assoc-ref (get-row db) "Name2"))
diff --git a/gn/data/hits.scm b/gn/data/hits.scm
index a66eee5..f0a24f3 100644
--- a/gn/data/hits.scm
+++ b/gn/data/hits.scm
@@ -17,5 +17,5 @@
             ))
 
 (define (get-next-hit-for-precompute db prev-id)
-  (dbi-query db (string-append "select Locus, DataId, ProbeSetId from ProbeSetXRef where DataId>" (int-to-string prev-id) " AND Locus_old is NULL ORDER BY DataId LIMIT 1"))
+  (dbi-query db (string-append "select Locus, DataId, ProbeSetId, ProbeSetFreezeId from ProbeSetXRef where DataId>" (int-to-string prev-id) " AND Locus_old is NULL ORDER BY DataId LIMIT 1"))
   (get-row db))