# Migrate GN1 Clustering

GeneNetwork1 has clustering output that we want to migrate to GN2. For example, go to

=> http://gn1-lily.genenetwork.org/ GN1 on Lily

Select Type -> CRTD mRNA data and do a search for 'synap*'. Click on the top 10 results checkboxes and Add to the basket (add is an icon). Now click on 'Select all' and the 'Heat map' icons. Computation may take a while.

Next click on 'Cluster traits' and 'Redraw' map. This is the one we want in GN3/GN2!

=> ./heatmap.png

## Members

* fredm
* pjotr

## Useful links

=> https://github.com/genenetwork/genenetwork1/tree/master/web/webqtl/heatmap Implementation

## Implementation

As a first step the computations should move to GN3 with proper regression/unit testing scripts. Next wire them up as REST API endpoints and add it to the GN2 web interface:

- [ ] Move computation to GN3
- [ ] Create REST API endpoints
- [ ] Add regression/unit tests in GN3
- [ ] Add to GN2 web interface