# Tasks for Hasitha

## Tags

* kanban: hasitha
* assigned: hasitha
* status: in progress

## Tasks

### Notes
* 

### This week
* [ ] Implementing CRAM encoding methods in GBAM
*       - [ ] ReadName tokenization pipeline - could save ~6% space using this technique. Need to work on decoding.
* [ ] Starting off with Cigar compression sub project with Andrea
* [ ] Discuss AGC and population compression with Andrea

### Later
* [ ] 

### Even later

* [ ]

### On Hold
* [ ] GBAM reader using noodles

## Done

* [X] Moving GBAM python and rust stuff to C
* [X] Fixing memory issues in C
* [X] SAM input to GBAM in Rust
* [X] agc-rs setup testing on M1 mac