From d0f5bae2c42ba5a4191bf56064e5cf22b8456efb Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Wed, 6 Mar 2024 07:57:50 -0600 Subject: Edits Pjotr --- topics/systems/fire-up-genenetwork-system-container.gmi | 11 +++++++++++ 1 file changed, 11 insertions(+) (limited to 'topics') diff --git a/topics/systems/fire-up-genenetwork-system-container.gmi b/topics/systems/fire-up-genenetwork-system-container.gmi index bb2e55e..11cd9d2 100644 --- a/topics/systems/fire-up-genenetwork-system-container.gmi +++ b/topics/systems/fire-up-genenetwork-system-container.gmi @@ -14,6 +14,7 @@ We have the following check list * [ ] Create a system definition * [ ] Fire up container and get a shell inside using nsenter * [ ] Start mariadb +* [ ] Start redis ## Create a system definition @@ -129,3 +130,13 @@ herd start mysql | db_webqtl_s | +---------------------------+ ``` + +Once I got this working, however, I decided to run mariadb on the base system instead (outside the container). The same with redis (see below). + +# Start redis + +After adding the default redis-service make sure the database is mounted on /var/lib/redis. `herd status` in the container will tell redis is running. + +Note that, again, file permissions may prevent redis from running. Debug output appears in /var/log/messages. + +The way to deal with this is chown in the activation stage. The alternative is to run a service directly on the host machine. -- cgit v1.2.3