From c535013f8dad2b39cf8dadff61cea49e7ccef3c5 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Wed, 17 Apr 2024 03:07:20 -0500
Subject: mgamma: convert tasks

---
 issues/mgamma/mgamma-convert.gmi | 18 ++++++++++++++++++
 1 file changed, 18 insertions(+)
 create mode 100644 issues/mgamma/mgamma-convert.gmi

(limited to 'issues')

diff --git a/issues/mgamma/mgamma-convert.gmi b/issues/mgamma/mgamma-convert.gmi
new file mode 100644
index 0000000..d0ece51
--- /dev/null
+++ b/issues/mgamma/mgamma-convert.gmi
@@ -0,0 +1,18 @@
+# MGAMMA Convert
+
+MGamma can convert between different formats.
+
+# Tags
+
+* assigned: pjotrp, artyom
+* type: feature
+* priority: high
+
+# Tasks
+
+* [ ] Store genotypes as floats instead of doubles in lmdb
+* [ ] Add annotations to genotype lmdb format - probably as the first named columns
+* [ ] Provide a metadata header in JSON that tracks such info and a version
+* [ ] Convert genotypes from strings using Rqtl2 CSV and metadata-JSON version of the control format, see
+
+=> https://kbroman.org/qtl2/assets/vignettes/input_files.html
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