From e2dc25663035715d1088f6cc16a62a9f02fe9512 Mon Sep 17 00:00:00 2001 From: Frederick Muriuki Muriithi Date: Mon, 16 May 2022 09:08:37 +0300 Subject: New Issue: Remove extra pcorrs options --- issues/remove-extraneous-pcorrs-options.gmi | 30 +++++++++++++++++++++++++++++ 1 file changed, 30 insertions(+) create mode 100644 issues/remove-extraneous-pcorrs-options.gmi (limited to 'issues/remove-extraneous-pcorrs-options.gmi') diff --git a/issues/remove-extraneous-pcorrs-options.gmi b/issues/remove-extraneous-pcorrs-options.gmi new file mode 100644 index 0000000..1ec1c9d --- /dev/null +++ b/issues/remove-extraneous-pcorrs-options.gmi @@ -0,0 +1,30 @@ +# Remove Extra Partial Correlations Options + +## Tags + +* assigned: fredm +* keywords: partial correlations +* status: in progress +* type: bug +* priority: high + +## Description + +When running the partial correlations feature against an entire dataset, the "Compute" element gives the following options, from which the user can select: + +* Genetic Correlation, Pearson's r +* Genetic Correlation, Spearman's rho +* SGO Literature Correlation +* Tissue Correlation, Pearson's r +* Tissue Correlation, Spearman's rho + +@robw was of the opinion that this is too much, and is entirely unnecessary, suggesting the provision of only two options: + +* Pearson's r +* Spearman's rho + +This will have corresponding changes in code to get rid of all the code dealing with the differences that were inherent in the former 5 options. + +## Related Issues and Topics + +=> ../topics/gn1-migration-to-gn2/partial-correlations.gmi -- cgit v1.2.3