From d376e98b271eea35e8bc493f283de21257f94ae6 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Wed, 26 Jun 2024 08:32:28 -0500
Subject: New Issue: gn-uploader - check against genotypes in the database.

---
 issues/gn-uploader/check-genotypes-in-database-too.gmi | 17 +++++++++++++++++
 1 file changed, 17 insertions(+)
 create mode 100644 issues/gn-uploader/check-genotypes-in-database-too.gmi

(limited to 'issues/gn-uploader')

diff --git a/issues/gn-uploader/check-genotypes-in-database-too.gmi b/issues/gn-uploader/check-genotypes-in-database-too.gmi
new file mode 100644
index 0000000..ee2ac1d
--- /dev/null
+++ b/issues/gn-uploader/check-genotypes-in-database-too.gmi
@@ -0,0 +1,17 @@
+# Check Genotypes in the Database for R/qtl2 Uploads
+
+## Tags
+
+* type: bug
+* assigned: fredm
+* priority: high
+* status: open
+* keywords: gn-uploader, uploader, upload, genotypes, geno
+
+## Description
+
+Currently, the uploader expects that a R/qtl2 bundle be self-contained, i.e. it contains all the genotypes and other data that fully describe the data in that bundle.
+
+This is unnecessary, in a lot of situations, seeing as Genenetwork might already have the appropriate genotypes already in its database.
+
+This issue tracks the implementation for the check of the genotypes against both the genotypes provided in the bundle, and those already in the database.
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