From 85b455965119768db0e6480836acaae9e7be8d5c Mon Sep 17 00:00:00 2001
From: zsloan
Date: Mon, 17 Oct 2022 13:11:05 -0500
Subject: Create correlation-missing-file.gmi

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 issues/correlation-missing-file.gmi | 12 ++++++++++++
 1 file changed, 12 insertions(+)
 create mode 100644 issues/correlation-missing-file.gmi

(limited to 'issues/correlation-missing-file.gmi')

diff --git a/issues/correlation-missing-file.gmi b/issues/correlation-missing-file.gmi
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+# Correlations fail for at least some ProbeSet datasets (as the target dataset)
+
+## How to reproduce
+
+- https://genenetwork.org/show_trait?trait_id=P40630_SWEEQMAEVGR_2&dataset=EPFL-ETHZ-BXD-LivProtCD-HF-1119
+- Use the default dataset for correlation (the same as the trait)
+- You should get the following error:
+
+GeneNetwork tux01:gene:2.11-rc2-gn_20221013-4eb4beafd 
+    [Errno 2] No such file or directory: '/home/gn2/production/tmp/gn2/gn2/ProbeSetFreezeId_886_EPFL/ETHZ BXD Liver Proteome CD-HFD (Nov19)' (error)
+    
+This obviously has something to do with the sample data files, though not sure what yet. 
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