From f71ccd4d9440f2caaca4618322a7fa271d7d010b Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Thu, 17 Aug 2023 10:44:18 +0200
Subject: GNSoC update

---
 topics/biohackathon/GNGSoC2023.gmi | 29 +++++++++++++++++++++++++++++
 1 file changed, 29 insertions(+)

diff --git a/topics/biohackathon/GNGSoC2023.gmi b/topics/biohackathon/GNGSoC2023.gmi
index 7863bcd..2ede8f7 100644
--- a/topics/biohackathon/GNGSoC2023.gmi
+++ b/topics/biohackathon/GNGSoC2023.gmi
@@ -67,6 +67,11 @@ git repo genenetwork-machines, guix-bioinformatics
 
 * Arun has cgit running on his own server - soon bringing up tux02 after resolving https
 
+### Week 8
+
+* cgit deployment at https://git.genenetwork.org/
+* guix forge
+
 ### More
 
 => https://ci.genenetwork.org/jobs/guix-bioinformatics
@@ -130,6 +135,11 @@ git repo genenetwork3
 * RDF improvements with ontology
 * Inconsistencies and privacy discussion today
 
+### Week 8
+
+* Transformed most tables now
+* guile-lmdb started by Alex
+
 ## LLMs & metadata (RDF)
 
 * lead: Shelby
@@ -178,6 +188,11 @@ git repo genenetwork3
 
 * Working FLASK app ready for testing - Rupert will have a go
 
+### Week 8
+
+* Working prototype!
+* references as JSON
+
 ## API to access data from GN
 
 * lead: Rupert
@@ -236,6 +251,11 @@ git repo gn-docs & genenetwork3 & SPARQL
 * Test version of API is running at https://luna.genenetwork.org/api/v2.0/
 * We'll continue building up facilities
 
+### Week 8
+
+- R script to parse API by Rupert
+- Move forward with populations/strains and datasets
+
 ## Editing data
 
 * lead: Fred
@@ -270,6 +290,11 @@ git repo gn-docs & genenetwork3 & SPARQL
 
 * Fred has moved code into a new repo for https://github.com/genenetwork/gn-auth
 
+### Week 8
+
+* gn-auth is building locally and needs to go on the forge
+* case attributes
+
 ## Guix parametrization
 
 * lead: Sarthak
@@ -307,6 +332,10 @@ git repo gn-docs & genenetwork3 & SPARQL
 
 * Agreed on final deliverables for GSoC
 
+### Week 8
+
+* Milestone on dependencies!
+
 ## Links
 
 * Matrix room is GNSoC2023
-- 
cgit v1.2.3