From cbd18816c34acfa21c172b111919f7056c593e22 Mon Sep 17 00:00:00 2001 From: Frederick Muriuki Muriithi Date: Tue, 22 Mar 2022 14:16:27 +0300 Subject: Move issue to correct directory --- TempDataSet-object-has-no-attribute.gmi | 50 -------------------------- issues/TempDataSet-object-has-no-attribute.gmi | 50 ++++++++++++++++++++++++++ 2 files changed, 50 insertions(+), 50 deletions(-) delete mode 100644 TempDataSet-object-has-no-attribute.gmi create mode 100644 issues/TempDataSet-object-has-no-attribute.gmi diff --git a/TempDataSet-object-has-no-attribute.gmi b/TempDataSet-object-has-no-attribute.gmi deleted file mode 100644 index ce2459b..0000000 --- a/TempDataSet-object-has-no-attribute.gmi +++ /dev/null @@ -1,50 +0,0 @@ -# 'TempDataSet' object has no attribute 'query_for_group' (error) - -## Tags - -* assigned: zsloan, bonfacem -* priority: high -* type: bug -* status: unclear -* keywords: TempDataSet, from github - -## Description - -=> https://github.com/genenetwork/genenetwork2/issues/592 From GitHub - -After successful entry of new BXD trait data (both my own data and the example BXD set from the website), I tried to correlate the trait with the BXD phenotypes, by clicking the correlate button. This produced the error below: - -GeneNetwork tux01:gene:2.11-rc2-staging-427071fc7 http://www.genenetwork.org/corr_compute (12:29PM UTC Jul 16, 2021) -'TempDataSet' object has no attribute 'query_for_group' (error) -File "/export/local/home/gn2/production/gene/wqflask/base/data_set.py", line 334, in init -dataset.query_for_group) - - - - -Hi Rob and Zachary, - -Thanks for getting back so quickly. There is no urgency for me. I managed -to upload the trait as a batch file in the old version of genenetwork. - -The trait data that I tried to upload and check on GN2 was the -median-lateral position of the representation of visual space on V1. It was -old data that we had, but never uploaded, because we were investigating a -specific cross for another location trait with an interesting QTL. Rob, -your email spiked my interest again. I'll send a reply in the next few days. - -For testing purposes, the trait sequence was : X X X 0.3391 0.2467 0.6381 X -0.244 X 0.5926 0.3004 0.6346 0.3103 0.3372 X 0.4933 0.4008 0.404 X 0.4062 X -0.484 X X X 0.3358 0.3724 0.2757 X 0.2401 0.3712 0.2365 0.3328 X 0.3525 X X -0.3288 0.3354 X 0.4069 X X X X X X X X X X X X X X X X X X X X X X X X X X -X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X -X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X -X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X -X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X -X X X X X X X X X X X X X X X X X X X X X -but also the sample from the website did not work for me. - - - - -@bonfacem might also be interested in this issue diff --git a/issues/TempDataSet-object-has-no-attribute.gmi b/issues/TempDataSet-object-has-no-attribute.gmi new file mode 100644 index 0000000..ce2459b --- /dev/null +++ b/issues/TempDataSet-object-has-no-attribute.gmi @@ -0,0 +1,50 @@ +# 'TempDataSet' object has no attribute 'query_for_group' (error) + +## Tags + +* assigned: zsloan, bonfacem +* priority: high +* type: bug +* status: unclear +* keywords: TempDataSet, from github + +## Description + +=> https://github.com/genenetwork/genenetwork2/issues/592 From GitHub + +After successful entry of new BXD trait data (both my own data and the example BXD set from the website), I tried to correlate the trait with the BXD phenotypes, by clicking the correlate button. This produced the error below: + +GeneNetwork tux01:gene:2.11-rc2-staging-427071fc7 http://www.genenetwork.org/corr_compute (12:29PM UTC Jul 16, 2021) +'TempDataSet' object has no attribute 'query_for_group' (error) +File "/export/local/home/gn2/production/gene/wqflask/base/data_set.py", line 334, in init +dataset.query_for_group) + + + + +Hi Rob and Zachary, + +Thanks for getting back so quickly. There is no urgency for me. I managed +to upload the trait as a batch file in the old version of genenetwork. + +The trait data that I tried to upload and check on GN2 was the +median-lateral position of the representation of visual space on V1. It was +old data that we had, but never uploaded, because we were investigating a +specific cross for another location trait with an interesting QTL. Rob, +your email spiked my interest again. I'll send a reply in the next few days. + +For testing purposes, the trait sequence was : X X X 0.3391 0.2467 0.6381 X +0.244 X 0.5926 0.3004 0.6346 0.3103 0.3372 X 0.4933 0.4008 0.404 X 0.4062 X +0.484 X X X 0.3358 0.3724 0.2757 X 0.2401 0.3712 0.2365 0.3328 X 0.3525 X X +0.3288 0.3354 X 0.4069 X X X X X X X X X X X X X X X X X X X X X X X X X X +X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X +X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X +X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X +X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X +X X X X X X X X X X X X X X X X X X X X X +but also the sample from the website did not work for me. + + + + +@bonfacem might also be interested in this issue -- cgit v1.2.3