From 4d68928c6b1f6676a75ced373ab2e4105ae9fa7d Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Sun, 11 Dec 2022 11:22:32 -0600 Subject: pairscan --- issues/genenetwork1/gn1-pairscan.gmi | 10 ++++++++-- 1 file changed, 8 insertions(+), 2 deletions(-) diff --git a/issues/genenetwork1/gn1-pairscan.gmi b/issues/genenetwork1/gn1-pairscan.gmi index f58c6b3..a2be87f 100644 --- a/issues/genenetwork1/gn1-pairscan.gmi +++ b/issues/genenetwork1/gn1-pairscan.gmi @@ -20,7 +20,7 @@ ImportError: No module named direct * priority: critical * keywords: missing dependency, binary blob, GN1 * assigned: pjotrp -* status: unclear +* status: testing # Notes @@ -39,7 +39,7 @@ from my gn1-python24-site-packages folder from lily there's a direct.so{,.bak} f and a fix in guix-bioinformatics: ``` -gn: Add python24-direct +gn: Add python24-direct-gn ``` it is not on Tux01, so let's update from @@ -102,3 +102,9 @@ we are now using that for genenetwork1. Patchelf makes it refer to the correct libstdc++.so.6 (namely one provided by Guix) so we don't need to worry about it being specifically propagated. I'm having trouble actually running the genenetwork1 container so Pjotr said he'd test it out. + +# Testing + +The direct.so binary is now on files.genenetwork.org. + +=> https://files.genenetwork.org/software/ -- cgit v1.2.3