From 3f0bda550fb3e1135ee1c57bdafa7c2502a43b70 Mon Sep 17 00:00:00 2001 From: Arun Isaac Date: Wed, 15 Feb 2023 17:05:21 +0000 Subject: Support searching for SNP names. --- issues/support-searching-using-snp-names.gmi | 10 ++++++++++ 1 file changed, 10 insertions(+) create mode 100644 issues/support-searching-using-snp-names.gmi diff --git a/issues/support-searching-using-snp-names.gmi b/issues/support-searching-using-snp-names.gmi new file mode 100644 index 0000000..ba9fd92 --- /dev/null +++ b/issues/support-searching-using-snp-names.gmi @@ -0,0 +1,10 @@ +# Support searching using SNP names + +* tags: enhancement + +SNPs are named in an rs### form (for example, rs429358). +=> https://en.wikipedia.org/wiki/Single-nucleotide_polymorphism#Nomenclature +We should permit the user to search genenetwork using these SNP names. Currently, we only permit searching using explicit coordinates (for example, "chr:19 position:44908684"). The user has to look up the SNP name in an external database and resolve it to coordinates before searching. This is a needless extra step and can be automated. + +Implementing this will require us to have a database (perhaps dbSNP) of all SNP names somewhere in GeneNetwork. +=> https://en.wikipedia.org/wiki/DbSNP dbSNP -- cgit v1.2.3