RNA sequencing for BXD strains on SOLiD by David Li.
All Bam files alignment done by Xusheng Wang
Aligned files were uploaded to Partek Genomic Suite 6.5 (version 6.10.0810) and processed by K Mozhui
Normalization: RPKM (reads per kilobase per million mapped reads)
Batch effect due to low exonic reads for batch 2

Revision 1.6 Untrimmed (current) LRS=(23 999) ->350 records
Max LRS = 102.6 Record Id:uthsc_nr_015498, Gene Symbol:1500004A13Rik **Note: 1 sample BXD45 and BXD34 removed. BXD41 switched to BXD1 as a second posible candidate.

Revision 1.5 Untrimmed LRS=(23 999) ->268 records
Max LRS = 80.0 Record Id:uthsc_nm_001039533, Gene Symbol:Pdxdc1 **Note: 1 sample BXD45 removed. BXD41 switched to BXD1 as a second posible candidate.

Revision 1.4 Untrimmed LRS=(23 999) ->246 records
Max LRS = 80.0 Record Id:uthsc_nm_001039533, Gene Symbol:Pdxdc1 **Note: 1 sample BXD45 removed and keep BXD41

Revision 1.3 Untrimmed LRS=(23 999) ->233 records
Max LRS = 80.7 Record Id:uthsc_nm_001039533, Gene Symbol:Pdxdc1

Revision 1.2 Untrimmed LRS=(23 999) ->190 records
Max LRS = 56.9 Record Id:uthsc_nr_003513, Gene Symbol:Neat1

Revision 1 Untrimmed LRS=(23 999) ->126 records
Max LRS = 35.3 Record Id:uthsc_nm_001113412, Gene Symbol:Fggy