All animals were raised at Beth Israel Deaconess Medical Center in SPF facilities from stock obtained from either Jackson Laboratory or UTHSC. All mice were killed by decapitation. Whole brain dissections were performed at Beth Israel Deaconess Medical Center by Glenn Rosen and colleagues. Neocortex samples were close to complete but are likely to include variable amounts of underlying white matter. Samples may also include parts of the pyriform cortex and subiculum.

All animals used in this study were either 3 or 14 days of age. A pool of dissected neocortical tissue from three naive animals of the same strain and age were collected in one session and used to generate RNA samples. The great majority (75%) of animals were sacrificed between 9:30 AM and 11:30 AM. All animals were sacrificed between 9 AM and 5 PM during the light phase. All RNA samples were extracted at Beth Israel Deaconess Medical Center by Glenn D. Rosen and colleagues.

Index Strain Age Batch ID Sample ID Tube ID
1 BXD1 P3 2 5384138018_F 236
2 BXD1 P3 3 5384138058_A 239
3 BXD2 P3 2 5384138018_C 168
4 BXD2 P3 1 5448576044_F 167
5 BXD5 P3 7 5384138020_A 273
6 BXD5 P3 4 5452241022_C 267
7 BXD6 P3 3 5384138048_A 107
8 BXD6 P3 4 5452241007_A 108
9 BXD8 P3 6 5384138009_A 113
10 BXD8 P3 7 5384138021_C 115
11 BXD9 P3 5 5452241004_F 289
12 BXD9 P3 4 5452241022_D 288
13 BXD11 P3 8 5237939010_A 117
14 BXD11 P3 1 5448576044_D 120
15 BXD12 P3 6 5384138009_B 130
16 BXD12 P3 7 5384138021_B 132
17 BXD13 P3 7 5384138020_F 161
18 BXD13 P3 5 5452241004_C 164
19 BXD14 P3 5 5452241004_B 158
20 BXD14 P3 6 5452241033_D 424
21 BXD15 P3 3 5452241008_C 437
22 BXD15 P3 4 5452241023_D 438
23 BXD16 P3 3 5384138048_D 170
24 BXD16 P3 4 5452241007_D 172
25 BXD18 P3 8 5448576010_A 390
26 BXD18 P3 1 5448576045_E 392
27 BXD19 P3 8 5237939010_E 210
28 BXD19 P3 1 5448576045_A 211
29 BXD20 P3 5 5452241017_B 439
30 BXD20 P3 6 5452241033_E 441
31 BXD21 P3 7 5384138021_F 341
32 BXD21 P3 6 5384138053_F 315
33 BXD24a P3 8 5237939012_B 251
34 BXD24a P3 7 5384138020_B 250
35 BXD27 P3 8 5237939012_D 298
36 BXD27 P3 1 5448576045_C 300
37 BXD28 P3 2 5384138049_B 550
38 BXD28 P3 1 5448576029_F 548
39 BXD29 P3 2 5384138047_F 502
40 BXD29 P3 1 5448576029_D 501
41 BXD31 P3 5 5452241024_D 579
42 BXD31 P3 6 5452241035_D 582
43 BXD32 P3 5 5452241006_F 407
44 BXD32 P3 6 5452241033_C 408
45 BXD34 P3 8 5237939012_F 345
46 BXD34 P3 4 5452241022_F 355
47 BXD36 P3 7 5384138016_A 429
48 BXD36 P3 8 5448576010_D 430
49 BXD38 P3 2 5384138041_F 327
50 BXD38 P3 3 5384138058_E 328
51 BXD39 P3 7 5384138016_E 515
52 BXD39 P3 5 5452241024_A 518
53 BXD40 P3 2 5384138041_C 373
54 BXD40 P3 3 5452241008_A 375
55 BXD42 P3 3 5452241008_E 485
56 BXD42 P3 4 5452241023_F 486
57 BXD51 P3 5 5452241024_F 621
58 BXD51 P3 6 5452241035_F 622
59 BXD61 P3 4 5452241031_C 554
60 BXD61 P3 3 5452241034_A 552
61 BXD70 P3 2 5384138049_D 590
62 BXD70 P3 1 5448576044_B 589
63 BXD73 P3 2 5384138049_E 603
64 BXD73 P3 8 5448576011_E 605