From e34e7da50fc0ff5ed41e8bdaf2b1d41c9e9cf534 Mon Sep 17 00:00:00 2001 From: Bonface Date: Thu, 15 Feb 2024 06:09:54 -0600 Subject: Update dataset RTF Files. --- .../datasets/UT_ILM_BXD_hipp_NON_0909/notes.rtf | 23 ---------------------- 1 file changed, 23 deletions(-) delete mode 100644 general/datasets/UT_ILM_BXD_hipp_NON_0909/notes.rtf (limited to 'general/datasets/UT_ILM_BXD_hipp_NON_0909/notes.rtf') diff --git a/general/datasets/UT_ILM_BXD_hipp_NON_0909/notes.rtf b/general/datasets/UT_ILM_BXD_hipp_NON_0909/notes.rtf deleted file mode 100644 index 35247b6..0000000 --- a/general/datasets/UT_ILM_BXD_hipp_NON_0909/notes.rtf +++ /dev/null @@ -1,23 +0,0 @@ -

Hippocampus 5 Conditions
-Illumina Rank Invariant Normalized; Log2 Transformed and Z-Scored
-Batch and Outlier Analysis on Partek Genomic Suite 6.6
-ANOVA Done with batch (BATCH 1 AND 2); Batch effect removed
-K MOZHUI (KMOZHUI@UTHSC.EDU) 12-Nov-12
-Outliers removed are: 4060001003_A, 4060001010_D, 4060001012_A, 4060001012_C, 4060001012_E, AND 4060001078_A
-Number of samples = 284
-Number of probes = 46643

- -
    -
  1. UTHSC Hippocampus Illumina v6.1 5Trt (Nov12) RankInv LRS=(46 999)-> 1331
    - ProbeSetID:ILM3440048 Gene:Cdkl2 Max LRS=192
    2. -
  2. UTHSC Hippocampus Illumina v6.1 NON (Nov12) RankInv LRS=(46 999)-> 219
    - ProbeSetID:ILM6350725 Gene:C14orf119 Max LRS=97.8
    3. -
  3. UTHSC Hippocampus Illumina v6.1 NOS (Nov12) RankInv LRS=(46 999)-> 404
    - ProbeSetID:ILM3440048 Gene:Cdkl2 Max LRS=106.6
    4. -
  4. UTHSC Hippocampus Illumina v6.1 NOE (Nov12) RankInv LRS=(46 999)-> 509
    - ProbeSetID:ILM5270066 Gene:MGC67181 Max LRS=151
    5. -
  5. UTHSC Hippocampus Illumina v6.1 RSS (Nov12) RankInv LRS=(46 999)-> 415
    - ProbeSetID:ILM5720687 Gene:Abhd16a Max LRS=121.7
    6. -
  6. UTHSC Hippocampus Illumina v6.1 RSE (Nov12) RankInv LRS=(46 999)-> 421
    - ProbeSetID:ILM6350725 Gene:C14orf119 Max LRS=144.1
    7. -
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