From d029d5d7f8ead1f1de8d318045004a4a6f68f5fb Mon Sep 17 00:00:00 2001 From: Bonface Date: Fri, 9 Feb 2024 09:41:28 -0600 Subject: Update dataset RTF Files. --- .../datasets/UTHSC_SPL_RMA_1210M/processing.rtf | 1932 ++++++++++++++++++++ 1 file changed, 1932 insertions(+) create mode 100644 general/datasets/UTHSC_SPL_RMA_1210M/processing.rtf (limited to 'general/datasets/UTHSC_SPL_RMA_1210M/processing.rtf') diff --git a/general/datasets/UTHSC_SPL_RMA_1210M/processing.rtf b/general/datasets/UTHSC_SPL_RMA_1210M/processing.rtf new file mode 100644 index 0000000..deaf264 --- /dev/null +++ b/general/datasets/UTHSC_SPL_RMA_1210M/processing.rtf @@ -0,0 +1,1932 @@ +
Data Processing. Array data sets were generated by the vendors GCOS system. Expression values were logged and then were further normalized and rescaled so that the mean value for each array data set is 8 units with a standard deviation of 2 units. Data were processed by Arthur Centeno.
+ +Batch Effects. This data set required some correction for batch effects and the data in this initial release incorporate any additional corrections. There are several additional confounder-like factors that should be considered:
+ +Data Release. This data set was first uploaded into GeneNetwork by Arthur Centeno, October 11, 2010 and made accessible without a password to all users on November 1, 2010. The initial data release had numerous strain identification errors that have now largely been fixed. Based on an analysis of the top 20 Mendelian loci, the following 21 strains were likely to have been incorrectly identified or assigned in the current release:
+ +Data Evaluation Summary
+ +Table 1 (please confirm that these assignments are after correction)
+ +++ ++ +
++ + ++ ++ +
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