From d029d5d7f8ead1f1de8d318045004a4a6f68f5fb Mon Sep 17 00:00:00 2001 From: Bonface Date: Fri, 9 Feb 2024 09:41:28 -0600 Subject: Update dataset RTF Files. --- general/datasets/TIGEM_hg38_ret_rna_seq_0916/processing.rtf | 3 +++ 1 file changed, 3 insertions(+) create mode 100644 general/datasets/TIGEM_hg38_ret_rna_seq_0916/processing.rtf (limited to 'general/datasets/TIGEM_hg38_ret_rna_seq_0916/processing.rtf') diff --git a/general/datasets/TIGEM_hg38_ret_rna_seq_0916/processing.rtf b/general/datasets/TIGEM_hg38_ret_rna_seq_0916/processing.rtf new file mode 100644 index 0000000..7d8d4b3 --- /dev/null +++ b/general/datasets/TIGEM_hg38_ret_rna_seq_0916/processing.rtf @@ -0,0 +1,3 @@ +

Data analysis

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The exploratory analysis, whose steps are shown in Figure 1, was carried out with the ‘tuxedo’ software suite (Trapnell et al., 2010) and led to the definition of the Observed Transcriptome (ObsT). The conservative analysis (Figure 1) was carried out by running the RNA-Seq by Expectation-Maximization (RSEM) package (Li & Dewey, 2011) and led to the definition of the RefT.

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