The study included 241 females (aged 50 to 90 ± 2 days at the start of the experiment) from B6, D2, and 35 advanced intercross BXD strains (about 2 mice per strain and per condition). Mice were divided into 4 groups of Control (CTL, 53 mice for 31 strains), Chronic Mild Stress (CMS, 64 mice for 32 strains), Drinking in Dark (DID, 64 mice for 35 strains), and CMS+DID (60 mice for 35 strains). Mice in CTL were normally handled, while mice in other groups were singly housed in shoebox cages, with food and water provided ad libitum except when the water was replaced by 20% (v/v) EtOH (see below) for DID and CMS+DID groups (detailed treatments and schemes are showing in the Table and Figure). The ambient temperature was 21 ± 2°C, and the light cycle was 7:00/19:00 for CTL, and 23:00/11:00 the rest groups lights on/off. The animals were weighed weekly to assess health and to provide the basis for calculating the amount of EtOH consumed in grams per kilogram. All procedures were approved by the UTHSC Institutional Animal Care and Use Committee.
+ +The table of samples that are finally used for this study.
+ +|
+ Index + |
+
+ ID + |
+
+ Strain + |
+
+ Sex + |
+
+ Treatment Group + |
+
+ Tissue + |
+
|
+ 1 + |
+
+ CMS030716_12 + |
+
+ BXD68 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 2 + |
+
+ CMS030716_18 + |
+
+ BXD40 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 3 + |
+
+ CMS030716_19 + |
+
+ BXD40 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 4 + |
+
+ CMS030916_02 + |
+
+ BXD101 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 5 + |
+
+ CMS030916_09 + |
+
+ BXD101 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 6 + |
+
+ CMS030916_11 + |
+
+ BXD79 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 7 + |
+
+ CMS030916_14 + |
+
+ BXD48a + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 8 + |
+
+ CMS030916_20 + |
+
+ BXD65b + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 9 + |
+
+ CMS030916_23 + |
+
+ BXD65b + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 10 + |
+
+ CMS030916_32 + |
+
+ BXD86 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 11 + |
+
+ CMS032817_02 + |
+
+ BXD48 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 12 + |
+
+ CMS032817_28 + |
+
+ BXD66 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 13 + |
+
+ CMS032917_08 + |
+
+ BXD48 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 14 + |
+
+ CMS032917_24 + |
+
+ BXD70 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 15 + |
+
+ CMS032917_26 + |
+
+ BXD87 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 16 + |
+
+ CMS032917_33 + |
+
+ BXD70 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 17 + |
+
+ CMS033017_05 + |
+
+ BXD78 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 18 + |
+
+ CMS033017_25 + |
+
+ BXD78 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 19 + |
+
+ CMS061218_12 + |
+
+ BXD87 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 20 + |
+
+ CMS061218_13 + |
+
+ BXD60 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 21 + |
+
+ CMS061218_14 + |
+
+ BXD71 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 22 + |
+
+ CMS071216_17 + |
+
+ BXD24 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 23 + |
+
+ CMS071216_23 + |
+
+ BXD73B + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 24 + |
+
+ CMS071216_25 + |
+
+ BXD48a + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 25 + |
+
+ CMS071316_06 + |
+
+ BXD90 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 26 + |
+
+ CMS071316_08 + |
+
+ BXD66 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 27 + |
+
+ CMS071316_14 + |
+
+ BXD87 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 28 + |
+
+ CMS071316_17 + |
+
+ BXD62 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 29 + |
+
+ CMS071316_18 + |
+
+ BXD65 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 30 + |
+
+ CMS071316_32 + |
+
+ BXD90 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 31 + |
+
+ CMS071416_06 + |
+
+ BXD50 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 32 + |
+
+ CMS082817_07 + |
+
+ BXD44 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 33 + |
+
+ CMS082817_25 + |
+
+ BXD71 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 34 + |
+
+ CMS082917_16 + |
+
+ BXD79 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 35 + |
+
+ CMS083017_07 + |
+
+ BXD69 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 36 + |
+
+ CMS083017_25 + |
+
+ BXD32 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 37 + |
+
+ CMS092018_01 + |
+
+ DBA/2J + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 38 + |
+
+ CMS092018_05 + |
+
+ C57BL/6J + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 39 + |
+
+ CMS092118_08 + |
+
+ C57BL/6J + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 40 + |
+
+ CMS102716_01 + |
+
+ BXD83 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 41 + |
+
+ CMS102716_02 + |
+
+ BXD75 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 42 + |
+
+ CMS102716_03 + |
+
+ BXD73a + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 43 + |
+
+ CMS102716_05 + |
+
+ BXD73a + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 44 + |
+
+ CMS102716_06 + |
+
+ BXD34 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 45 + |
+
+ CMS102716_07 + |
+
+ BXD24 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 46 + |
+
+ CMS102716_08 + |
+
+ BXD60 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 47 + |
+
+ CMS102716_11 + |
+
+ BXD34 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 48 + |
+
+ CMS102716_12 + |
+
+ BXD62 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 49 + |
+
+ CMS102716_14 + |
+
+ BXD83 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 50 + |
+
+ CMS102716_15 + |
+
+ BXD69 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 51 + |
+
+ CMS102716_16 + |
+
+ BXD77 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 52 + |
+
+ CMS102716_20 + |
+
+ BXD50 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 53 + |
+
+ CMS102816_02 + |
+
+ C57BL/6J + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 54 + |
+
+ CMS102816_03 + |
+
+ C57BL/6J + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 55 + |
+
+ CMS102816_04 + |
+
+ DBA/2J + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 56 + |
+
+ CMS102816_06 + |
+
+ DBA/2J + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 57 + |
+
+ CMS102816_10 + |
+
+ C57BL/6J + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 58 + |
+
+ CMS102816_11 + |
+
+ BXD100 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 59 + |
+
+ CMS102816_13 + |
+
+ BXD75 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 60 + |
+
+ CMS102816_14 + |
+
+ BXD77 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 61 + |
+
+ CMS102816_17 + |
+
+ BXD100 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 62 + |
+
+ CMS102816_18 + |
+
+ BXD43 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 63 + |
+
+ CMS102816_20 + |
+
+ BXD32 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 64 + |
+
+ CMS102816_21 + |
+
+ BXD65 + |
+
+ F + |
+
+ CMS + |
+
+ hippocampus + |
+
|
+ 65 + |
+
+ CMS030716_01 + |
+
+ BXD55 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 66 + |
+
+ CMS030716_08 + |
+
+ BXD63 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 67 + |
+
+ CMS030716_09 + |
+
+ BXD65b + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 68 + |
+
+ CMS030716_15 + |
+
+ BXD69 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 69 + |
+
+ CMS030716_27 + |
+
+ BXD86 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 70 + |
+
+ CMS030716_29 + |
+
+ BXD55 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 71 + |
+
+ CMS030716_30 + |
+
+ BXD62 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 72 + |
+
+ CMS030716_31 + |
+
+ BXD65b + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 73 + |
+
+ CMS030916_15 + |
+
+ BXD69 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 74 + |
+
+ CMS030916_16 + |
+
+ BXD68 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 75 + |
+
+ CMS030916_17 + |
+
+ BXD40 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 76 + |
+
+ CMS030916_26 + |
+
+ BXD79 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 77 + |
+
+ CMS032817_10 + |
+
+ BXD87 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 78 + |
+
+ CMS032817_18 + |
+
+ BXD70 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 79 + |
+
+ CMS032817_25 + |
+
+ BXD48 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 80 + |
+
+ CMS032817_27 + |
+
+ BXD83 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 81 + |
+
+ CMS032817_31 + |
+
+ BXD71 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 82 + |
+
+ CMS032817_32 + |
+
+ BXD70 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 83 + |
+
+ CMS032917_15 + |
+
+ BXD86 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 84 + |
+
+ CMS032917_17 + |
+
+ BXD71 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 85 + |
+
+ CMS032917_25 + |
+
+ BXD78 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 86 + |
+
+ CMS033017_04 + |
+
+ BXD78 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 87 + |
+
+ CMS033017_11 + |
+
+ BXD83 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 88 + |
+
+ CMS033017_13 + |
+
+ BXD73 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 89 + |
+
+ CMS071216_01 + |
+
+ BXD50 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 90 + |
+
+ CMS071216_24 + |
+
+ BXD100 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 91 + |
+
+ CMS071316_05 + |
+
+ BXD51 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 92 + |
+
+ CMS071316_20 + |
+
+ BXD65 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 93 + |
+
+ CMS071316_22 + |
+
+ BXD90 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 94 + |
+
+ CMS071316_29 + |
+
+ BXD51 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 95 + |
+
+ CMS071416_01 + |
+
+ BXD100 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 96 + |
+
+ CMS071416_08 + |
+
+ BXD24 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 97 + |
+
+ CMS071416_13 + |
+
+ BXD48a + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 98 + |
+
+ CMS071416_19 + |
+
+ BXD32 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 99 + |
+
+ CMS071416_27 + |
+
+ BXD63 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 100 + |
+
+ CMS082817_02 + |
+
+ BXD48 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 101 + |
+
+ CMS082817_03 + |
+
+ BXD40 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 102 + |
+
+ CMS082817_09 + |
+
+ DBA/2J + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 103 + |
+
+ CMS082817_28 + |
+
+ BXD79 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 104 + |
+
+ CMS082917_07 + |
+
+ BXD43 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 105 + |
+
+ CMS082917_10 + |
+
+ BXD44 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 106 + |
+
+ CMS082917_18 + |
+
+ BXD32 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 107 + |
+
+ CMS082917_21 + |
+
+ BXD24 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 108 + |
+
+ CMS082917_29 + |
+
+ BXD87 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 109 + |
+
+ CMS083017_02 + |
+
+ BXD101 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 110 + |
+
+ CMS083017_03 + |
+
+ BXD66 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 111 + |
+
+ CMS083017_11 + |
+
+ DBA/2J + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 112 + |
+
+ CMS083017_28 + |
+
+ BXD101 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 113 + |
+
+ CMS111716_07 + |
+
+ BXD75 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 114 + |
+
+ CMS111716_11 + |
+
+ BXD73b + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 115 + |
+
+ CMS111716_12 + |
+
+ BXD75 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 116 + |
+
+ CMS111716_14 + |
+
+ BXD73a + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 117 + |
+
+ CMS111716_17 + |
+
+ BXD50 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 118 + |
+
+ CMS111816_05 + |
+
+ BXD77 + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 119 + |
+
+ CMS111816_07 + |
+
+ BXD73b + |
+
+ F + |
+
+ CMS+DID + |
+
+ hippocampus + |
+
|
+ 120 + |
+
+ CMS111816_12 + |
+
+ BXD73a + |
+
+ F + |
+
+ CMS+DID + |
+
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