From b2feda451ccfbeaed02dce9088d6dd228cf15861 Mon Sep 17 00:00:00 2001 From: Bonface Date: Tue, 13 Feb 2024 23:52:26 -0600 Subject: Update dataset RTF Files. --- general/datasets/Kin_ysm_dfc_0711/tissue.rtf | 109 +++++++++++++++++++++++++++ 1 file changed, 109 insertions(+) create mode 100644 general/datasets/Kin_ysm_dfc_0711/tissue.rtf (limited to 'general/datasets/Kin_ysm_dfc_0711/tissue.rtf') diff --git a/general/datasets/Kin_ysm_dfc_0711/tissue.rtf b/general/datasets/Kin_ysm_dfc_0711/tissue.rtf new file mode 100644 index 0000000..f08a838 --- /dev/null +++ b/general/datasets/Kin_ysm_dfc_0711/tissue.rtf @@ -0,0 +1,109 @@ +

Tissue was microdissected from 13 regions, including 9 distinct neocortical areas, from both left and right sides of four late second trimester human brain specimens. Gene- and exon-level differential expression analyses were performed by mixed model, nested analysis of variance using the XRAY software from Biotique Systems. Further details available in Johnson, Kawasawa, et al., "Functional and Evolutionary Insights into Human Brain Development through Global Transcriptome Analysis" Neuron, Volume 62, Issue 4, 2009.

+ +

Ethnicity codes are as follows: AA = African American, A = ,  A/E =  X,  As,=  , H = , E = , CC =  and n/a= unknown

+ +

 

+ +

This track displays exon microarray expression data from the late mid-fetal human brain, generated by the Sestan Lab at Yale University. The data represent 13 brain regions, including nine areas of neocortex, and both hemispheres. By default, arrays are grouped by the median for each brain region, including each neocortical area. Alternatively, neocortex areas can be grouped together; arrays can be grouped by mean; or all 95 arrays can be shown individually.

+ +

Table 2 | Ontology and nomenclature of analyzed brain regions and neocortical areas.

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Period 1Period 2Period 3 - 15
FC: Frontal cerebral wallFCOFC: Orbital prefrontal cortex
  DFC: Dorsolateral prefrontal cortex
  VFC: Ventrolateral prefrontal cortex
  MFC: Medial prefrontal cortex
  M1C: Primary motor (M1) cortex
PC: Parietal cerebral wallPCS1C: Primary somatosensory (S1) cortex
  IPC: Posterior inferior parietal cortex
TC: Temporal cerebral wallTC A1C: Primary auditory (A1) cortex
  STC: Posterior superior temporal cortex
  ITC: Inferior temporal cortex
OC: Occipital cerebral wallOCV1C: Primary visual (V1) cortex
HIP: Hippocampal anlageHIPHIP: Hippocampus
  AMY: Amygdala
VF: Ventral forebrainCGE: Caudal ganglionic eminenceSTR: Striatum
 LGE: Lateral ganglionic eminence 
 MGE: Medial ganglionic eminence 
DIE: DiencephalonDTH: Dorsal thalamusMD: Mediodorsal nucleus of thalamus
URL: Upper (rostral) rhombic lipURLCBC: Cerebellar cortex
-- cgit v1.2.3