From d029d5d7f8ead1f1de8d318045004a4a6f68f5fb Mon Sep 17 00:00:00 2001 From: Bonface Date: Fri, 9 Feb 2024 09:41:28 -0600 Subject: Update dataset RTF Files. --- .../INIA_AmgCoh_0311/experiment-design.rtf | 1152 ++++++++++++++++++++ 1 file changed, 1152 insertions(+) create mode 100644 general/datasets/INIA_AmgCoh_0311/experiment-design.rtf (limited to 'general/datasets/INIA_AmgCoh_0311/experiment-design.rtf') diff --git a/general/datasets/INIA_AmgCoh_0311/experiment-design.rtf b/general/datasets/INIA_AmgCoh_0311/experiment-design.rtf new file mode 100644 index 0000000..126d431 --- /dev/null +++ b/general/datasets/INIA_AmgCoh_0311/experiment-design.rtf @@ -0,0 +1,1152 @@ +

Data Evaluation Summary

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  1. eQLTs with LOD >10 (LRS>46.1): n = 525
  2. +
  3. eQTL with high LOD and LRS: Trait ID 10513604 (Hdhd3) LOD = 39.8, LRS = 183.5
  4. +
  5. Lowest mean value: Trait ID 10344361, mean = 3.998
  6. +
  7. Highest mean value: Trait ID 10598025, mean = 14.475 (MT-ND1)
  8. +
  9. Greatest sex difference: Trait ID: 10606178 (Xist)
  10. +
  11. Great variation within and among strains: Trait ID 10454192 (Ttr +
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    + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
    IndexArray IDTissueStrainAgeSexDate sacrificeTime sacrifice
    1R6853BLBLAC57BL/6J77F8/18/108:45AM to 12:30 PM
    2R6861BLBLAC57BL/6J77M8/18/108:45AM to 12:30 PM
    3R6851BLBLAD2B6F177F8/18/108:45AM to 12:30 PM
    4R6859BLBLAD2B6F177M8/18/108:45AM to 12:30 PM
    5R6863BLBLADBA/2J77F8/18/108:45AM to 12:30 PM
    6R6865BLBLADBA/2J68M8/18/108:45AM to 12:30 PM
    7R6857BLBLAB6D2F169F8/18/108:45AM to 12:30 PM
    8R6855BLBLAB6D2F169M8/18/108:45AM to 12:30 PM
    9R6799BLBLABXD171F8/17/101:15 PM to 5 PM
    10R6795BLBLABXD185M8/17/101:15 PM to 5 PM
    11R6787BLBLABXD1187F8/17/101:15 PM to 5 PM
    12R6785BLBLABXD1176M8/17/101:15 PM to 5 PM
    13R6819BLBLABXD1278F8/18/108:45AM to 12:30 PM
    14R6789BLBLABXD1273M8/17/101:15 PM to 5 PM
    15R6805BLBLABXD1277M8/17/101:15 PM to 5 PM
    16R6291BLBLABXD13N/AM6/11/09N/A
    17R6811BLBLABXD1481F8/18/108:45AM to 12:30 PM
    18R6825BLBLABXD1481M8/18/108:45AM to 12:30 PM
    19R6657BLBLABXD16N/AM1/8/08N/A
    20R6054BLBLABXD19N/AF2/26/08N/A
    21R6052BLBLABXD19N/AM2/26/08N/A
    22R6803BLBLABXD2485F8/17/101:15 PM to 5 PM
    23R6817BLBLABXD2486M8/18/108:45AM to 12:30 PM
    24R6063BLBLABXD25N/AF3/12/08N/A
    25R6062BLBLABXD25N/AM3/12/08N/A
    26R6659BLBLABXD27N/AF1/8/08N/A
    27R6791BLBLABXD2775F8/17/101:15 PM to 5 PM
    28R6797BLBLABXD2971F8/17/101:15 PM to 5 PM
    29R6793BLBLABXD2971M8/17/101:15 PM to 5 PM
    30R6815BLBLABXD3174F8/18/108:45AM to 12:30 PM
    31R6801BLBLABXD3173M8/17/101:15 PM to 5 PM
    32R6915BLBLABXD3281F8/18/101 PM to 6:45 PM
    33R6845BLBLABXD3281M8/18/108:45AM to 12:30 PM
    34R6821BLBLABXD3477F8/18/108:45AM to 12:30 PM
    35R6807BLBLABXD3477M8/18/108:45AM to 12:30 PM
    36R6057BLBLABXD38N/AF2/26/08N/A
    37R6056BLBLABXD38N/AM2/26/08N/A
    38R6827BLBLABXD3979F8/18/108:45AM to 12:30 PM
    39R6813BLBLABXD3979M8/18/108:45AM to 12:30 PM
    40R6847BLBLABXD4085F8/18/108:45AM to 12:30 PM
    41R6849BLBLABXD4085M8/18/108:45AM to 12:30 PM
    42R6809BLBLABXD4287F8/18/108:45AM to 12:30 PM
    43R6823BLBLABXD4287M8/18/108:45AM to 12:30 PM
    44R6759BLBLABXD4381F8/17/109:30 AM to 12:30AM
    45R6757BLBLABXD4381M8/17/109:30 AM to 12:30AM
    46R6745BLBLABXD4483F8/17/109:30 AM to 12:30AM
    47R6763BLBLABXD4577F8/17/109:30 AM to 12:30AM
    48R6761BLBLABXD4577M8/17/109:30 AM to 12:30AM
    49R6879BLBLABXD4876F8/18/101 PM to 6:45 PM
    50R6881BLBLABXD4876M8/18/101 PM to 6:45 PM
    51R6751BLBLABXD4984F8/17/109:30 AM to 12:30AM
    52R6747BLBLABXD4984M8/17/109:30 AM to 12:30AM
    53R6104BLBLABXD5N/Af10/23/09N/A
    54R6103BLBLABXD5N/AM10/23/09N/A
    55R6889BLBLABXD5077F8/18/101 PM to 6:45 PM
    56R6891BLBLABXD5077M8/18/101 PM to 6:45 PM
    57R6074BLBLABXD51N/AF3/12/08N/A
    58R6699BLBLABXD51N/AM4/30/09N/A
    59R6917BLBLABXD5684F8/18/101 PM to 6:45 PM
    60R6893BLBLABXD5677M8/18/101 PM to 6:45 PM
    61R6769BLBLABXD6070F8/17/109:30 AM to 12:30AM
    62R6771BLBLABXD6070M8/17/101:15 PM to 5 PM
    63R6655BLBLABXD61N/AF1/29/08N/A
    64R6653BLBLABXD61N/AM1/29/08N/A
    65R6835BLBLABXD6283F8/18/108:45AM to 12:30 PM
    66R6843BLBLABXD6283M8/18/108:45AM to 12:30 PM
    67R6887BLBLABXD6377F8/18/101 PM to 6:45 PM
    68R6885BLBLABXD6377M8/18/101 PM to 6:45 PM
    69R6877BLBLABXD6584F8/18/101 PM to 6:45 PM
    70R6873BLBLABXD6584M8/18/101 PM to 6:45 PM
    71R6929BLBLABXD6876F8/18/101 PM to 6:45 PM
    72R6931BLBLABXD6876M8/18/101 PM to 6:45 PM
    73R6775BLBLABXD6969F8/17/101:15 PM to 5 PM
    74R6773BLBLABXD6980M8/17/101:15 PM to 5 PM
    75R6925BLBLABXD7076F8/18/101 PM to 6:45 PM
    76R6921BLBLABXD7076M8/17/061 PM to 6:45 PM
    77R6869BLBLABXD7176F8/18/101 PM to 6:45 PM
    78R6871BLBLABXD7176M8/18/101 PM to 6:45 PM
    79R6777BLBLABXD7383F8/17/101:15 PM to 5 PM
    80R6779BLBLABXD7383M8/17/101:15 PM to 5 PM
    81R6837BLBLABXD7576F8/18/108:45AM to 12:30 PM
    82R6829BLBLABXD7576M8/18/108:45AM to 12:30 PM
    83R6933BLBLABXD7987F8/18/101 PM to 6:45 PM
    84R6935BLBLABXD7987M8/18/101 PM to 6:45 PM
    85R6781BLBLABXD8073F8/17/101:15 PM to 5 PM
    86R6783BLBLABXD8073M8/17/101:15 PM to 5 PM
    87R6913BLBLABXD8381F8/18/101 PM to 6:45 PM
    88R6911BLBLABXD8381M8/18/101 PM to 6:45 PM
    89R6841BLBLABXD8476F8/18/108:45AM to 12:30 PM
    90R6833BLBLABXD8476M8/18/108:45AM to 12:30 PM
    91R6937BLBLABXD8574F8/18/101 PM to 6:45 PM
    92R6939BLBLABXD8574M8/18/101 PM to 6:45 PM
    93R6909BLBLABXD8783F8/18/101 PM to 6:45 PM
    94R6895BLBLABXD8982F8/18/101 PM to 6:45 PM
    95R6897BLBLABXD8982M8/18/101 PM to 6:45 PM
    96R6903BLBLABXD9082F8/18/101 PM to 6:45 PM
    97R6905BLBLABXD9082M8/18/101 PM to 6:45 PM
    98R6923BLBLABXD9286F8/18/101 PM to 6:45 PM
    99R6927BLBLABXD9289M8/18/101 PM to 6:45 PM
    100R6919BLBLABXD9576F8/18/101 PM to 6:45 PM
    101R6867BLBLABXD9576M8/18/108:45AM to 12:30 PM
    102R6899BLBLABXD9771F8/18/101 PM to 6:45 PM
    103R6901BLBLABXD9771M8/18/101 PM to 6:45 PM
    104R6875BLBLABXD9977F8/18/101 PM to 6:45 PM
    105R6883BLBLABXD9977M8/18/101 PM to 6:45 PM
    106R6831BLBLABXD10083M8/18/108:45AM to 12:30 PM
    107R6943BLBLABXD10189F8/18/101 PM to 6:45 PM
    108R6941BLBLABXD10189M8/18/101 PM to 6:45 PM
    109R6753BLBLABXD10288F8/17/109:30 AM to 12:30AM
    110R6755BLBLABXD10288M8/17/109:30 AM to 12:30AM
    111R6765BLBLABXD10378M8/17/109:30 AM to 12:30AM
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