From d029d5d7f8ead1f1de8d318045004a4a6f68f5fb Mon Sep 17 00:00:00 2001
From: Bonface
Date: Fri, 9 Feb 2024 09:41:28 -0600
Subject: Update dataset RTF Files.

---
 general/datasets/Hipp_Illumina_RankInv_1006/platform.rtf | 9 +++++++++
 1 file changed, 9 insertions(+)
 create mode 100644 general/datasets/Hipp_Illumina_RankInv_1006/platform.rtf

(limited to 'general/datasets/Hipp_Illumina_RankInv_1006/platform.rtf')

diff --git a/general/datasets/Hipp_Illumina_RankInv_1006/platform.rtf b/general/datasets/Hipp_Illumina_RankInv_1006/platform.rtf
new file mode 100644
index 0000000..cb0e31f
--- /dev/null
+++ b/general/datasets/Hipp_Illumina_RankInv_1006/platform.rtf
@@ -0,0 +1,9 @@
+<blockquote>
+<p><strong>Illumina Sentrix Mouse-6 BeadArray Platform: </strong>The <a class="fs14" href="http://www.illumina.com" target="_blank">Mouse6</a> array consists of 46,116 unique probe sequences, each 50 nucleotides in length, that have been arrayed on glass slides using a novel bead technology.</p>
+
+<p>Dunning M, Smith M, Thorne N, Tavare S (2006) beadarray: An R package to analyse Illumina BeadArrays. R News (the Newsletter of the P Project) 6:17-23. (see pages 17-23 of http://CRAN.R-project.org/doc/Rnews/Rnews_2006-5.pdf).</p>
+
+<p>ANNOTATION: In spring of 2007, Robert W. Williams and Hongqiang Li reannotated the Illumina Mouse-6 array content. This new annotation is now incorporated into GeneNetwork. For 46166 probes on the Mouse 6 array platform (including control probes) we have identified 35975 NCBI Entrez Gene IDs; 26481 matched human Gene IDs; 23899 matched rat Gene IDs; 26883 NCBI HomoloGene IDs; and 12791 OMIM IDs.</p>
+
+<p>Position data for the 50-mer Illumina Mouse-6 array were initially downloaded from Sanger at http://www.sanger.ac.uk/Users/avc/Illumina/Mouse-6_V1.gff.gz but we then updated all positions by BLAT analysis from mm6 positions to mm8 positions (Hongqiang Li).</p>
+</blockquote>
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