From d029d5d7f8ead1f1de8d318045004a4a6f68f5fb Mon Sep 17 00:00:00 2001
From: Bonface
Date: Fri, 9 Feb 2024 09:41:28 -0600
Subject: Update dataset RTF Files.

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 general/datasets/BR_M2_1106_R/summary.rtf | 5 +++++
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 create mode 100644 general/datasets/BR_M2_1106_R/summary.rtf

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+<p>A <a href="http://phenogen.ucdenver.edu"> PhenoGen Informatics </a> data set. Please cite: Saba L, Bhave SV, Grahame N, Bice P, Lapadat R, Belknap J, Hoffman PL, Tabakoff B (<a class="fwn" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&amp;cmd=Retrieve&amp;dopt=AbstractPlus&amp;list_uids=16783646&amp;query_hl=8&amp;itool=pubmed_docsum">2006</a>) Candidate genes and their regulatory elements: alcohol preference and tolerance. Mammalian Genome 17:669-688 <a class="fwn" href="http://www.springerlink.com/content/224237686jx80v61/fulltext.pdf" target="_blank"><em>Full Text PDF Version</em></a>, <a class="fwn" href="http://www.springerlink.com/content/224237686jx80v61/fulltext.html" target="_blank"><em>Full Text HTML Version</em></a></p>
+
+<p>This November 2006 data freeze provides estimates of mRNA expression in whole brains of BXD recombinant inbred mice measured using Affymetrix MOE 430 version 2 micorarrays. Data were generated at the University of Colorado at Denver and Health Science Center (UCDHSC). Single whole brain samples were hybridized to 248 individual arrays. Data were processed using the RMA protocol followed by a secondary quantile normalization at the probe set level and a scale and location adjustment to ensure an average expression level of 8 units and a standard deviation of 2 units for easy comparison to other transforms.</p>
+
+<p>The <a href="http://phenogen.ucdenver.edu/PhenoGen/helpdocs/Viewing_Datasets.htm#publicDatasets"> PhenoGen Informatics </a> web site provides additional analytic tools and transforms associated with these data.</p>
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