From ed00507ec707b70382a984844fd3aabe68a06398 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Sun, 4 Dec 2022 12:33:42 -0600
Subject: Show list of up-to-date dependencies for GeneNetwork

---
 general/environments/environments.md | 1750 +++++++++++++++++++++++++++++++++-
 1 file changed, 1734 insertions(+), 16 deletions(-)

diff --git a/general/environments/environments.md b/general/environments/environments.md
index e516789..fb0eb22 100644
--- a/general/environments/environments.md
+++ b/general/environments/environments.md
@@ -1,18 +1,1736 @@
+# List system properties
+
+These are the software packages the GeneNetwork web-service currently uses.
+The list is generated by querying:
+
+```
+guix graph -L ~/guix-bioinformatics -L ~/guix-past genenetwork2|grep label > graph.txt
+sed 's/",//' graph.txt |cut -c 29- |sort|uniq > list.txt
+```
+
 ### System properties
 
-|  Operating System |   |   |   |
-|---|---|---|---|
-| Ubuntu  |  ubuntu-latest  |  [ubuntu](http://www.ubuntu.com) | Free software licenses (mainly GPL)  |
-|  **Database** |   |   |   |
-|  MariaDB | 10.X.XX  | [http://www.mariadb.org/](http://www.mariadb.org/)  | GPL (version 2)  |
-| **Python**  |   |   |   |
-|  Python | 3.8  | [http://www.python.org/](http://www.python.org/)  | Python Software Foundation License  |
-| Flask  | 1.1.2 | [http://flask.pocoo.org/](http://flask.pocoo.org/) | BSD   |
-| Jinja2  | 2.6  | [http://jinja.pocoo.org/](http://jinja.pocoo.org/ ) |  BSD |
-| NumPy  |  1.7.0 |  [http://www.numpy.org/](http://www.numpy.org/) | BSD-new  |
-| SciPy  | 0.11.0  | [http://www.scipy.org/]([http://www.scipy.org/])  | BSD-new  |
-| **JavaScript / CSS**  |   |   |   |
-| jQuery  | 1.10.2  | [http://jquery.com/]([http://jquery.com/)  | MIT  |
-|Bootstrap   |  3.3.0 | [http://getbootstrap.com/](http://getbootstrap.com/)   | MIT License (Apache License 2.0 prior to 3.1.0)  |
-|  DataTables |  1.10.19 |  [http://www.datatables.net/](http://www.datatables.net/) |  MIT |
-| CKEditor  | 4.13.0  | [http://ckeditor.com/](http://ckeditor.com/)  |  GPL, LGPL and MPL |
+Debian GNU/Linux 10 (buster)
+
+```
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+```
-- 
cgit v1.2.3