From 9d23142ec489402e994cf15585d8d094657de325 Mon Sep 17 00:00:00 2001 From: Flavia Villani Date: Wed, 5 Jul 2023 08:22:26 -0500 Subject: Update questions-to-ask-GN.md add additional questions to answer--- api/questions-to-ask-GN.md | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/api/questions-to-ask-GN.md b/api/questions-to-ask-GN.md index b2a7140..0bc66d6 100644 --- a/api/questions-to-ask-GN.md +++ b/api/questions-to-ask-GN.md @@ -544,3 +544,11 @@ Finally the SPARQL endpoint which is driven by RDF generated with Visit * https://sparql.genenetwork.org/sparql +* +### How many phenotypes do we have for each species? +Could we apply some filters to choose the phenotypes to use (is it easy to discard the mapping trait with specific LRS threshold)? + +### Are there genetic variants (SNPs, indels, etc.) linked to a particular trait? +It would be nice to insert a marker we are interested in and see the correlations with the traits, the result could be a graph or a table. + +### Which genes or genomic regions show conserved synteny across the species we are interested in? -- cgit v1.2.3