From 82151a2aeb34d98ec474c5de8f9efce7c507ac52 Mon Sep 17 00:00:00 2001 From: BonfaceKilz Date: Sat, 27 Nov 2021 09:22:17 +0300 Subject: story-boards: Add uploader --- story-boards/uploader/approve-reject-button.png | Bin 0 -> 2430 bytes story-boards/uploader/diffs-page.png | Bin 0 -> 374546 bytes .../uploader/download-sample-data-link.png | Bin 0 -> 9715 bytes story-boards/uploader/flash-message.png | Bin 0 -> 10401 bytes story-boards/uploader/json-diff.png | Bin 0 -> 23513 bytes story-boards/uploader/metadata-upload-form.png | Bin 0 -> 367729 bytes story-boards/uploader/traits-page-edit-button.png | Bin 0 -> 69804 bytes .../uploader/update-metadata-and-sample-data.md | 73 +++++++++++++++++++++ story-boards/uploader/updated-history.png | Bin 0 -> 79835 bytes 9 files changed, 73 insertions(+) create mode 100644 story-boards/uploader/approve-reject-button.png create mode 100644 story-boards/uploader/diffs-page.png create mode 100644 story-boards/uploader/download-sample-data-link.png create mode 100644 story-boards/uploader/flash-message.png create mode 100644 story-boards/uploader/json-diff.png create mode 100644 story-boards/uploader/metadata-upload-form.png create mode 100644 story-boards/uploader/traits-page-edit-button.png create mode 100644 story-boards/uploader/update-metadata-and-sample-data.md create mode 100644 story-boards/uploader/updated-history.png diff --git a/story-boards/uploader/approve-reject-button.png b/story-boards/uploader/approve-reject-button.png new file mode 100644 index 0000000..153f318 Binary files /dev/null and b/story-boards/uploader/approve-reject-button.png differ diff --git a/story-boards/uploader/diffs-page.png b/story-boards/uploader/diffs-page.png new file mode 100644 index 0000000..1cf120d Binary files /dev/null and b/story-boards/uploader/diffs-page.png differ diff --git a/story-boards/uploader/download-sample-data-link.png b/story-boards/uploader/download-sample-data-link.png new file mode 100644 index 0000000..d4e7be4 Binary files /dev/null and b/story-boards/uploader/download-sample-data-link.png differ diff --git a/story-boards/uploader/flash-message.png b/story-boards/uploader/flash-message.png new file mode 100644 index 0000000..ed14de1 Binary files /dev/null and b/story-boards/uploader/flash-message.png differ diff --git a/story-boards/uploader/json-diff.png b/story-boards/uploader/json-diff.png new file mode 100644 index 0000000..f8e4bee Binary files /dev/null and b/story-boards/uploader/json-diff.png differ diff --git a/story-boards/uploader/metadata-upload-form.png b/story-boards/uploader/metadata-upload-form.png new file mode 100644 index 0000000..475da8f Binary files /dev/null and b/story-boards/uploader/metadata-upload-form.png differ diff --git a/story-boards/uploader/traits-page-edit-button.png b/story-boards/uploader/traits-page-edit-button.png new file mode 100644 index 0000000..d12c542 Binary files /dev/null and b/story-boards/uploader/traits-page-edit-button.png differ diff --git a/story-boards/uploader/update-metadata-and-sample-data.md b/story-boards/uploader/update-metadata-and-sample-data.md new file mode 100644 index 0000000..3caf337 --- /dev/null +++ b/story-boards/uploader/update-metadata-and-sample-data.md @@ -0,0 +1,73 @@ +# Storyboard: Edit Metadata and sample data of published phenotypes + +It's important to edit metadata to adhere to a certain standard +format. In addition to that, researchers constantly want to modify +data from a given experiment without the constant nudging of the +database administrator. For published phenotypes, currently gn2 +supports editing data, given that the user has the right access +privileges. + +Before going any further, make sure you are signed in. + +# Go to the traits and analysis page of your phenotype + +In this page, if you have the right access privileges, you will see +the Edit button. + +[![Search page](./traits-page-edit-button.png "Traits Page")](https://genenetwork.org/show_trait?trait_id=10007&dataset=BXDPublish) + +To go to the edits page, click that "Edit" button + +# Edit the metadata + +On the metadata page, you will presented with a form with which you +can use to edit the metadata. Updating any of the field will update +the data. + +[![Metadata Upload Form](./metadata-upload-form.png "Metadata Upload Form")] + +To view the updated history, click the "Update History" text. You +will see your recent history: + +[![Updated History](./updated-history.png "Updated History")] + +# Editing sample data + +To download sample data, first download it, by clicking the "Sample +Data(CSV Download)" link: + +[![Download sample data link](./download-sample-data-link.png "Download sample data link")] + +Edit this file in excel and make sure to save it in csv format. +Thereafter, you will be presented with a flash message that indicates +a successful upload: + +[![Flash Message](./flash-message.png "Flash Message")] + + +## View your diffs + +Go to the [diffs page](https://genenetwork.org/datasets/diffs "diffs +page") where you will see your previous edits: + +[![Diffs Page](./diffs-page.png "Diffs Page")] + +If you the right curator access for a resource, you will see a +"reject" and "approve" button: + +[![Approve/ Reject button](./approve-reject-button.png "Approve/ Reject button")] + +Clicking one of the diffs will display the diff: + +[![JSON Diff view](./json-dif.png "JSON Diff view")] + +## Approve and Reject the changes + +If you have curator privileges over the resource, click the approve or +reject button depending on how satisfactory the changes are. + +## Check the traits page + +Finally, the data has been updated, and you can always go back to the +traits page to view the data. + diff --git a/story-boards/uploader/updated-history.png b/story-boards/uploader/updated-history.png new file mode 100644 index 0000000..463192b Binary files /dev/null and b/story-boards/uploader/updated-history.png differ -- cgit v1.2.3