From f5e833c0d72eaec80425203b15210ed304cc4811 Mon Sep 17 00:00:00 2001 From: Munyoki Kilyungi Date: Thu, 29 Feb 2024 04:04:34 +0300 Subject: Add an extra endpoint for metadata authorisation. * gn_auth/auth/authorisation/data/views.py: (metadata_resources): New end-point for authorising metadata data. * gn_auth/auth/authorisation/resources/models.py: Import sqlite3.Row. (__metadata_resource_data__): New function. (__assign_resource_owner_role__): Add __metadata_resource_data__ to the "resource_data_function" map. Signed-off-by: Munyoki Kilyungi --- gn_auth/auth/authorisation/resources/models.py | 19 +++++++++++++++++++ 1 file changed, 19 insertions(+) (limited to 'gn_auth/auth/authorisation/resources/models.py') diff --git a/gn_auth/auth/authorisation/resources/models.py b/gn_auth/auth/authorisation/resources/models.py index d6e3a1d..3693ad1 100644 --- a/gn_auth/auth/authorisation/resources/models.py +++ b/gn_auth/auth/authorisation/resources/models.py @@ -1,6 +1,7 @@ """Handle the management of resources.""" from uuid import UUID, uuid4 from functools import reduce, partial +from sqlite3 import Row from typing import Dict, Sequence, Optional from gn_auth.auth.db import sqlite3 as db @@ -35,6 +36,22 @@ from .phenotype import ( from .errors import MissingGroupError + +def __metadata_resource_data__( + cursor: db.DbCursor, + resource_id: UUID, + offset: int = 0, + limit: Optional[int] = None +) -> Sequence[Row]: + """Fetch metadata resources""" + cursor.execute( + ( + ("SELECT * FROM metadata_resources as mt \ +WHERE mt.resource_id=?") + + (f" LIMIT {limit} OFFSET {offset}" if bool(limit) else "")), + (str(resource_id),)) + return cursor.fetchall() + def __assign_resource_owner_role__(cursor, resource, user, group): """Assign `user` the 'Resource Owner' role for `resource`.""" cursor.execute( @@ -185,6 +202,7 @@ def resource_data(conn, resource, offset: int = 0, limit: Optional[int] = None) "mrna": mrna_resource_data, "genotype": genotype_resource_data, "phenotype": phenotype_resource_data, + "metadata": __metadata_resource_data__, "system": lambda *args: tuple(), "group": lambda *args: tuple() } @@ -291,6 +309,7 @@ def attach_resources_data( "mrna": mrna_attach_resources_data, "genotype": genotype_attach_resources_data, "phenotype": phenotype_attach_resources_data, + "metadata": lambda *args: [], "system": lambda *args: [], "group": lambda *args: [], "inbredset-group": lambda *args: [] -- cgit v1.2.3