From 060048cda4fe37bc869aad5cb005012ca7a65001 Mon Sep 17 00:00:00 2001 From: Munyoki Kilyungi Date: Fri, 23 Jan 2026 21:41:35 +0300 Subject: Update issue. Signed-off-by: Munyoki Kilyungi --- issues/rdf/rdf-refinement.gmi | 11 +++++++++-- 1 file changed, 9 insertions(+), 2 deletions(-) diff --git a/issues/rdf/rdf-refinement.gmi b/issues/rdf/rdf-refinement.gmi index 5caf29b0..216fbdb0 100644 --- a/issues/rdf/rdf-refinement.gmi +++ b/issues/rdf/rdf-refinement.gmi @@ -9,13 +9,16 @@ We have: => rdf.genenetwork.org -We want to make that entire site easily navigable; and make all terms self-explanatory. Beyond that get rid of all the blank nodes. Think of navigation akin to menu navigation from a website. +We want to make that entire site is easily navigatable; and make all terms self-explanatory. Beyond that get rid of all the blank nodes. Think of navigation akin to menu navigation from a website. ## Tasks -### Species/InbredSet/MappingMethod/AvgMethod +## Species/InbredSet/MappingMethod/AvgMethod +From this root node, one should be able to navigate to species, inbred-set groups, and datasets (TODO). + +=> https://rdf.genenetwork.org/v1/category/resource_classification_scheme GN Resource Classification Scheme * [X] Use resolvable mapping method. * [X] Create ttl file for more metadata around mapping/avg methods used in GN. @@ -32,3 +35,7 @@ Terms: * [X] gnt:genetic-type -> gnt:genetic_type * [X] skos:notation -> gnt:has_uniprot_taxon_id * [X] rdf:isDefinedBy -> gnt:has_wikidata_link + +## Genotypes/Phenotypes + +Ignored Probesets (these are too big to put into RDF.) -- cgit 1.4.1