"""This contains unit-tests for gn3.computations.diff""" import unittest import os from gn3.computations.diff import generate_diff TESTDIFF = """3,4c3,4 < C57BL/6J,x,x,x < BXD1,18.700,x,x --- > C57BL/6J,19.000,x,x > BXD1,15.700,x,x 6c6 < BXD11,18.900,x,x --- > BXD11,x,x,x """ class TestDiff(unittest.TestCase): """Test cases for computations.diff""" def test_generate_diff(self): """Test that the correct diff is generated""" data = os.path.join(os.path.dirname(__file__).split("unit")[0], "test_data/trait_data_10007.csv") edited_data = os.path.join(os.path.dirname(__file__).split("unit")[0], "test_data/edited_trait_data_10007.csv") self.assertEqual(generate_diff(data, edited_data), TESTDIFF)