"""test for biweight script""" from unittest import TestCase from unittest import mock from gn3.computations.biweight import calculate_biweight_corr class TestBiweight(TestCase): """test class for biweight""" @mock.patch("gn3.computations.biweight.subprocess.check_output") def test_calculate_biweight_corr(self, mock_check_output): """test for calculate_biweight_corr func""" mock_check_output.return_value = "0.1 0.5" results = calculate_biweight_corr(command="Rscript", path_to_script="./r_script.R", trait_vals=[ 1.2, 1.1, 1.9], target_vals=[1.9, 0.4, 1.1]) self.assertEqual(results, (0.1, 0.5))