"""Configuration settings for this project""" import tempfile import os BCRYPT_SALT = "$2b$12$mxLvu9XRLlIaaSeDxt8Sle" # Change this! DATA_DIR = "" GEMMA_WRAPPER_CMD = os.environ.get("GEMMA_WRAPPER", "gemma-wrapper") RQTL_WRAPPER_CMD = os.environ.get("RQTL_WRAPPER") CACHEDIR = "" REDIS_URI = "redis://localhost:6379/0" REDIS_JOB_QUEUE = "GN3::job-queue" TMPDIR = os.environ.get("TMPDIR", tempfile.gettempdir()) RQTL_WRAPPER = "rqtl_wrapper.R" # SQL confs SQL_URI = os.environ.get( "SQL_URI", "mysql://webqtlout:webqtlout@localhost/db_webqtl") SECRET_KEY = "password" SQLALCHEMY_TRACK_MODIFICATIONS = False # gn2 results only used in fetching dataset info GN2_BASE_URL = "http://www.genenetwork.org/" # biweight script BIWEIGHT_RSCRIPT = "~/genenetwork3/scripts/calculate_biweight.R" # qtlreaper command REAPER_COMMAND = "{}/bin/qtlreaper".format(os.environ.get("GUIX_ENVIRONMENT")) # genotype files GENOTYPE_FILES = os.environ.get( "GENOTYPE_FILES", "{}/genotype_files/genotype".format(os.environ.get("HOME"))) # CROSS-ORIGIN SETUP CORS_ORIGINS = [ "http://localhost:*", "http://127.0.0.1:*" ] CORS_HEADERS = [ "Content-Type", "Authorization", "Access-Control-Allow-Credentials" ]