From 3ded952f40f486d9aa69746eac2afe7f67fef790 Mon Sep 17 00:00:00 2001
From: Muriithi Frederick Muriuki
Date: Wed, 1 Sep 2021 11:08:38 +0300
Subject: Fix linting and typing issues

Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi
---
 tests/unit/db/test_genotypes.py | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

(limited to 'tests/unit')

diff --git a/tests/unit/db/test_genotypes.py b/tests/unit/db/test_genotypes.py
index a05ce48..c125224 100644
--- a/tests/unit/db/test_genotypes.py
+++ b/tests/unit/db/test_genotypes.py
@@ -18,9 +18,9 @@ class TestGenotypes(TestCase):
                 "@type:test_type", "@mat:test_mat   \t", "@pat:test_pat ",
                 "@het: test_het ", "@unk: test_unk", "@other: test_other",
                 "@brrr: test_brrr "]),
-        (("group", "test_group"), ("filler", "test_filler"),
-         ("type", "test_type"), ("mat", "test_mat"), ("pat", "test_pat"),
-         ("het", "test_het"), ("unk", "test_unk")))
+            (("group", "test_group"), ("filler", "test_filler"),
+             ("type", "test_type"), ("mat", "test_mat"), ("pat", "test_pat"),
+             ("het", "test_het"), ("unk", "test_unk")))
 
     def test_parse_genotype_header(self):
         """Test that the genotype header is parsed correctly."""
@@ -71,7 +71,7 @@ class TestGenotypes(TestCase):
                  (("chr", "1"), ("name", "rs31443144"), ("cM", 2.0),
                   ("Mb", 3.0),
                   ("genotype", (-1, -1, 1, 0, 1, -1, "U", 1, -1, -1)))]]:
-            with self.subTest(line = line):
+            with self.subTest(line=line):
                 self.assertEqual(
                     parse_genotype_marker(line, geno_obj, parlist),
                     expected)
@@ -110,7 +110,7 @@ class TestGenotypes(TestCase):
                    ("loci",
                     ({"chr": "1", "name": "rs31443144", "cM": 2.0, "Mb": None,
                       "genotype": (-1, 1, 1, 0, 1, -1, "U", 1, -1, -1)},))),)]]:
-            with self.subTest(markers = markers):
+            with self.subTest(markers=markers):
                 self.assertEqual(
                     build_genotype_chromosomes(geno_obj, markers),
                     expected)
-- 
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