From f17b489c8eb94050b81b1a59fb43954d036f7c38 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Wed, 15 Sep 2021 06:01:44 +0300
Subject: Fix format of arguments and expected values

* tests/unit/computations/test_heatmap.py: ordering is not longer provided as
  a list of tuples; the ordering values are just a list of numbers now. This
  commit updates the test to take this into consideration.

* tests/unit/computations/test_qtlreaper.py: the 'Chr' value if numeric, is
  represented by an actual number, not a string. This commit updates the code
  to take this into consideration.
---
 tests/unit/computations/test_qtlreaper.py | 20 ++++++++++----------
 1 file changed, 10 insertions(+), 10 deletions(-)

(limited to 'tests/unit/computations/test_qtlreaper.py')

diff --git a/tests/unit/computations/test_qtlreaper.py b/tests/unit/computations/test_qtlreaper.py
index 495ed97..1d67827 100644
--- a/tests/unit/computations/test_qtlreaper.py
+++ b/tests/unit/computations/test_qtlreaper.py
@@ -15,52 +15,52 @@ class TestQTLReaper(TestCase):
                 "tests/unit/computations/data/qtlreaper/main_output_sample.txt"),
             [
                 {
-                    "ID": "T1", "Locus": "rs31443144", "Chr": "1", "cM": 1.500,
+                    "ID": "T1", "Locus": "rs31443144", "Chr": 1, "cM": 1.500,
                     "Mb": 3.010, "LRS": 0.500, "Additive": -0.074,
                     "pValue": 1.000
                 },
                 {
-                    "ID": "T1", "Locus": "rs6269442", "Chr": "1", "cM": 1.500,
+                    "ID": "T1", "Locus": "rs6269442", "Chr": 1, "cM": 1.500,
                     "Mb": 3.492, "LRS": 0.500, "Additive": -0.074,
                     "pValue": 1.000
                 },
                 {
-                    "ID": "T1", "Locus": "rs32285189", "Chr": "1", "cM": 1.630,
+                    "ID": "T1", "Locus": "rs32285189", "Chr": 1, "cM": 1.630,
                     "Mb": 3.511, "LRS": 0.500, "Additive": -0.074,
                     "pValue": 1.000
                 },
                 {
-                    "ID": "T1", "Locus": "rs258367496", "Chr": "1", "cM": 1.630,
+                    "ID": "T1", "Locus": "rs258367496", "Chr": 1, "cM": 1.630,
                     "Mb": 3.660, "LRS": 0.500, "Additive": -0.074,
                     "pValue": 1.000
                 },
                 {
-                    "ID": "T1", "Locus": "rs32430919", "Chr": "1", "cM": 1.750,
+                    "ID": "T1", "Locus": "rs32430919", "Chr": 1, "cM": 1.750,
                     "Mb": 3.777, "LRS": 0.500, "Additive": -0.074,
                     "pValue": 1.000
                 },
                 {
-                    "ID": "T1", "Locus": "rs36251697", "Chr": "1", "cM": 1.880,
+                    "ID": "T1", "Locus": "rs36251697", "Chr": 1, "cM": 1.880,
                     "Mb": 3.812, "LRS": 0.500, "Additive": -0.074,
                     "pValue": 1.000
                 },
                 {
-                    "ID": "T1", "Locus": "rs30658298", "Chr": "1", "cM": 2.010,
+                    "ID": "T1", "Locus": "rs30658298", "Chr": 1, "cM": 2.010,
                     "Mb": 4.431, "LRS": 0.500, "Additive": -0.074,
                     "pValue": 1.000
                 },
                 {
-                    "ID": "T1", "Locus": "rs51852623", "Chr": "1", "cM": 2.010,
+                    "ID": "T1", "Locus": "rs51852623", "Chr": 1, "cM": 2.010,
                     "Mb": 4.447, "LRS": 0.500, "Additive": -0.074,
                     "pValue": 1.000
                 },
                 {
-                    "ID": "T1", "Locus": "rs31879829", "Chr": "1", "cM": 2.140,
+                    "ID": "T1", "Locus": "rs31879829", "Chr": 1, "cM": 2.140,
                     "Mb": 4.519, "LRS": 0.500, "Additive": -0.074,
                     "pValue": 1.000
                 },
                 {
-                    "ID": "T1", "Locus": "rs36742481", "Chr": "1", "cM": 2.140,
+                    "ID": "T1", "Locus": "rs36742481", "Chr": 1, "cM": 2.140,
                     "Mb": 4.776, "LRS": 0.500, "Additive": -0.074,
                     "pValue": 1.000
                 }
-- 
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