From 19783a18c2bc7941fc5980e593f19fb1d18c3623 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Mon, 27 Sep 2021 04:48:53 +0300
Subject: Update terminology: `strain` to `sample`

Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi

* Update the terminology used: use `sample` in place of `strain` according to
  Zachary's direction at
  https://github.com/genenetwork/genenetwork3/pull/37#issuecomment-926043306
---
 tests/unit/computations/test_parsers.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

(limited to 'tests/unit/computations/test_parsers.py')

diff --git a/tests/unit/computations/test_parsers.py b/tests/unit/computations/test_parsers.py
index 19c3067..b51b0bf 100644
--- a/tests/unit/computations/test_parsers.py
+++ b/tests/unit/computations/test_parsers.py
@@ -15,7 +15,7 @@ class TestParsers(unittest.TestCase):
 
     def test_parse_genofile_with_existing_file(self):
         """Test that a genotype file is parsed correctly"""
-        strains = ["bxd1", "bxd2"]
+        samples = ["bxd1", "bxd2"]
         genotypes = [
             {"chr": "1", "locus": "rs31443144",
              "cm": "1.50", "mb": "3.010274",
@@ -51,4 +51,4 @@ class TestParsers(unittest.TestCase):
             "../test_data/genotype.txt"
         ))
         self.assertEqual(parse_genofile(
-            test_genotype_file), (strains, genotypes))
+            test_genotype_file), (samples, genotypes))
-- 
cgit v1.2.3