From 99bf6b9c58b0962f9bc90aa0b575b2940b33cb07 Mon Sep 17 00:00:00 2001
From: Alexander_Kabui
Date: Tue, 8 Apr 2025 18:59:48 +0300
Subject: refactor: Explicity define no of cores for rqtl2 computation.

---
 scripts/rqtl2_wrapper.R | 2 ++
 1 file changed, 2 insertions(+)

(limited to 'scripts')

diff --git a/scripts/rqtl2_wrapper.R b/scripts/rqtl2_wrapper.R
index 91c1dd3..af13efa 100644
--- a/scripts/rqtl2_wrapper.R
+++ b/scripts/rqtl2_wrapper.R
@@ -32,6 +32,8 @@ NO_OF_CORES <- opt$cores
 SCAN_METHOD <- opt$method
 NO_OF_PERMUTATION <- opt$nperm
 
+NO_OF_CORES <- 20
+
 # Validate input and output file paths
 validate_file_paths <- function(opt) {
   if (is.null(opt$directory) || !dir.exists(opt$directory)) {
-- 
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