From 651c8ad9ae20ab52e7ab694c0caa9d92774b49b5 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Fri, 11 Feb 2022 05:45:24 +0300
Subject: Quote shell variables to prevent globbing

Quote the shell variables to prevent globbing and word splitting.
Deactivate this check for the specific lines that require intentional word
splitting
---
 scripts/laminar/gn3-lint.sh     | 4 ++--
 scripts/laminar/gn3-mypy.sh     | 4 ++--
 scripts/laminar/gn3-unittest.sh | 4 ++--
 3 files changed, 6 insertions(+), 6 deletions(-)

(limited to 'scripts')

diff --git a/scripts/laminar/gn3-lint.sh b/scripts/laminar/gn3-lint.sh
index b6f0c89..1299a96 100644
--- a/scripts/laminar/gn3-lint.sh
+++ b/scripts/laminar/gn3-lint.sh
@@ -4,7 +4,7 @@ set -e  # Abort on first error
 CUR_DIR=$PWD
 GN3_CI_DIR=$HOME/CI/genenetwork3/
 
-cd $GN3_CI_DIR
+cd "${GN3_CI_DIR}"
 git pull
 
 # Run Pylint
@@ -12,4 +12,4 @@ env GUIX_PACKAGE_PATH="$HOME/guix-bioinformatics:$HOME/guix-past/modules" \
     guix environment --load=guix.scm -- pylint sheepdog/worker.py gn3/ tests
 
 echo Done Running Pylint!
-cd $CUR_DIR
+cd "${CUR_DIR}"
diff --git a/scripts/laminar/gn3-mypy.sh b/scripts/laminar/gn3-mypy.sh
index a2a9782..6d04c35 100644
--- a/scripts/laminar/gn3-mypy.sh
+++ b/scripts/laminar/gn3-mypy.sh
@@ -4,7 +4,7 @@ set -e  # Abort on first error
 CUR_DIR=$PWD
 GN3_CI_DIR=$HOME/CI/genenetwork3/
 
-cd $GN3_CI_DIR
+cd "${GN3_CI_DIR}"
 git pull
 
 # Run Pylint
@@ -12,4 +12,4 @@ env GUIX_PACKAGE_PATH="$HOME/guix-bioinformatics:$HOME/guix-past/modules" \
     guix environment --load=guix.scm -- mypy .
 
 echo Done Running MyPy!
-cd $CUR_DIR
+cd "${CUR_DIR}"
diff --git a/scripts/laminar/gn3-unittest.sh b/scripts/laminar/gn3-unittest.sh
index 41dafe5..d18d5de 100644
--- a/scripts/laminar/gn3-unittest.sh
+++ b/scripts/laminar/gn3-unittest.sh
@@ -4,7 +4,7 @@ set -e  # Abort on first error
 CUR_DIR=$PWD
 GN3_CI_DIR=$HOME/CI/genenetwork3/
 
-cd $GN3_CI_DIR
+cd "${GN3_CI_DIR}"
 git pull
 
 # Run Pylint
@@ -12,4 +12,4 @@ env GUIX_PACKAGE_PATH="$HOME/guix-bioinformatics:$HOME/guix-past/modules" \
     guix environment --load=guix.scm -- python -m unittest discover
 
 echo Done Running Unittests!
-cd $CUR_DIR
+cd "${CUR_DIR}"
-- 
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