From 08a27b65b91cec12ec2a44945090ca8b9fabd8dd Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Fri, 11 Mar 2022 12:09:22 +0300
Subject: Fix typing errors

---
 gn3/db/genotypes.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

(limited to 'gn3/db')

diff --git a/gn3/db/genotypes.py b/gn3/db/genotypes.py
index 0e19a5f..6f867c7 100644
--- a/gn3/db/genotypes.py
+++ b/gn3/db/genotypes.py
@@ -50,8 +50,8 @@ def __load_genotype_samples_from_geno(genotype_filename: str):
 
     gzipped_filename = f"{genotype_filename}.gz"
     if os.path.isfile(gzipped_filename):
-        with gzip.open(gzipped_filename) as genofile:
-            rows = __remove_comments_and_empty_lines__(genofile.readlines())
+        with gzip.open(gzipped_filename) as gz_genofile:
+            rows = __remove_comments_and_empty_lines__(gz_genofile.readlines())
     else:
         with open(genotype_filename, encoding="utf8") as genofile:
             rows = __remove_comments_and_empty_lines__(genofile.readlines())
-- 
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