From fa08c4eeb2110dc280bb2d3a9334aabeaa1b5bfe Mon Sep 17 00:00:00 2001
From: Alexander_Kabui
Date: Thu, 23 Jan 2025 17:00:34 +0300
Subject: Refactor workspace directory creation to use pathlib's mkdir method.

---
 gn3/computations/rqtl2.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

(limited to 'gn3/computations/rqtl2.py')

diff --git a/gn3/computations/rqtl2.py b/gn3/computations/rqtl2.py
index 0022f61..a6f8bcb 100644
--- a/gn3/computations/rqtl2.py
+++ b/gn3/computations/rqtl2.py
@@ -3,6 +3,7 @@ import os
 import csv
 import uuid
 import json
+from pathlib import Path
 
 
 def generate_rqtl2_files(data, workspace_dir):
@@ -82,7 +83,7 @@ def create_file(file_path):
 def prepare_files(tmpdir):
     """Prepare necessary files and workspace dir  for computation."""
     workspace_dir = os.path.join(tmpdir, str(uuid.uuid4())) #
-    os.makedirs(workspace_dir)
+    Path(workspace_dir).mkdir(parents=False, exist_ok=True)
     input_file = os.path.join(workspace_dir, f"rqtl2-input-{uuid.uuid4()}.json")
     output_file = os.path.join(workspace_dir, f"rqtl2-output-{uuid.uuid4()}.json")
 
-- 
cgit 1.4.1