From d2314194549780997092d2688c47af5c63e06989 Mon Sep 17 00:00:00 2001
From: Alexander_Kabui
Date: Tue, 25 Feb 2025 13:25:21 +0300
Subject: fix: handle extra columns in permutations CSV reader to prevent
 unpacking error.

---
 gn3/computations/rqtl2.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'gn3/computations/rqtl2.py')

diff --git a/gn3/computations/rqtl2.py b/gn3/computations/rqtl2.py
index a06c929..b482c47 100644
--- a/gn3/computations/rqtl2.py
+++ b/gn3/computations/rqtl2.py
@@ -136,7 +136,7 @@ def process_permutation(data):
     with open(perm_file, "r", encoding="utf-8") as file_handler:
         reader = csv.reader(file_handler)
         phenotypes = next(reader)[1:]
-        perm_results = {_id:float(val) for (_id,val)  in reader}
+        perm_results = {_id: float(val) for _id, val, *_ in reader}
         _, significance = fetch_significance_results(data.get("significance_file"))
         return {
         "phenotypes": phenotypes,
-- 
cgit 1.4.1