From 35f0784ee32ccc76416d184ac65e8cad6f7aa490 Mon Sep 17 00:00:00 2001
From: zsloan
Date: Wed, 11 Aug 2021 17:36:18 +0000
Subject: Removed quotes from beginning and end of chromosome string

---
 gn3/computations/rqtl.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'gn3/computations/rqtl.py')

diff --git a/gn3/computations/rqtl.py b/gn3/computations/rqtl.py
index 092fac6..36c9fa2 100644
--- a/gn3/computations/rqtl.py
+++ b/gn3/computations/rqtl.py
@@ -119,7 +119,7 @@ def pairscan_for_figure(file_name: str) -> Dict:
             if i == 0: # Skip first line
                 continue
             line_items = [item.rstrip('\n') for item in line.split(",")]
-            chr_list.append(line_items[1])
+            chr_list.append(line_items[1][1:-1])
             pos_list.append(line_items[2])
         figure_data['chr'] = chr_list
         figure_data['pos'] = pos_list
-- 
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