From 9f24b15064bcebcda9cf2164ab7b7e89644e3103 Mon Sep 17 00:00:00 2001 From: Alexander Kabui Date: Sun, 2 May 2021 23:54:56 +0300 Subject: delete dataset and trait files --- gn3/api/traits.py | 53 ----------------------------------------------------- 1 file changed, 53 deletions(-) delete mode 100644 gn3/api/traits.py (limited to 'gn3/api/traits.py') diff --git a/gn3/api/traits.py b/gn3/api/traits.py deleted file mode 100644 index 002a281..0000000 --- a/gn3/api/traits.py +++ /dev/null @@ -1,53 +0,0 @@ -"""this module contains the all endpoints for traits""" -from unittest import mock - -from flask import Blueprint -from flask import jsonify -from flask import request - -from gn3.computations.traits import fetch_trait -from gn3.computations.traits import get_trait_info_data -from gn3.db_utils import database_connector - -trait = Blueprint("trait", __name__) - - -@trait.route("//") -def create_trait(trait_name, dataset_name): - """Endpoint for creating trait and fetching strain\ - values""" - - # xtodo replace the object at most this endpoint - # requires dataset_type,dataset_name ,dataset_id - trait_dataset = { - "name": dataset_name, - "id": 12, - "type": "ProbeSet" # temp values - } - conn, _cursor = database_connector() - - trait_results = fetch_trait(dataset=trait_dataset, - trait_name=trait_name, - database=conn) - - conn.close() - - return jsonify(trait_results) - - -@trait.route("/trait_info/", methods=["POST"]) -def fetch_trait_info(trait_name): - """Api endpoint for fetching the trait info \ - expects the trait and trait dataset to have\ - been created """ - data = request.get_json() - - trait_dataset = data["trait_dataset"] - trait_data = data["trait"] - _trait_name = trait_name # should be used as key to return results - - database_instance = mock.Mock() - - results = get_trait_info_data(trait_dataset, trait_data, database_instance) - - return jsonify(results) -- cgit v1.2.3