From 104723d9954359cbc10140c36d4ae4f8d2f4f7f4 Mon Sep 17 00:00:00 2001 From: Munyoki Kilyungi Date: Wed, 15 Feb 2023 00:25:20 +0300 Subject: Create API endpoint for fetching trait metadata * gn3/api/metadata.py (dataset_metadata): New function and endpoint. (jsonify_dataset_metadata): Rename to dataset_metadata. Signed-off-by: Munyoki Kilyungi --- gn3/api/metadata.py | 18 +++++++++++++++++- 1 file changed, 17 insertions(+), 1 deletion(-) (limited to 'gn3/api/metadata.py') diff --git a/gn3/api/metadata.py b/gn3/api/metadata.py index 8f6127f..f87743b 100644 --- a/gn3/api/metadata.py +++ b/gn3/api/metadata.py @@ -8,13 +8,14 @@ from flask import current_app from SPARQLWrapper import SPARQLWrapper from gn3.db.rdf import get_dataset_metadata +from gn3.db.rdf import get_trait_metadata metadata = Blueprint("metadata", __name__) @metadata.route("/dataset/", methods=["GET"]) -def jsonify_dataset_metadata(name): +def dataset_metadata(name): """Fetch a dataset's metadata given it's ACCESSION_ID""" try: return jsonify( @@ -26,3 +27,18 @@ def jsonify_dataset_metadata(name): # The virtuoso server is misconfigured or it isn't running at all except (RemoteDisconnected, URLError): return jsonify({}) + + +@metadata.route("/dataset//trait/", methods=["GET"]) +def trait_metadata(dataset_name, trait_name): + """Fetch a trait's metadata given the trait_name and dataset_name'""" + try: + return jsonify( + get_trait_metadata( + SPARQLWrapper(current_app.config.get("SPARQL_ENDPOINT")), + trait_name, dataset_name + ).data + ) + # The virtuoso server is misconfigured or it isn't running at all + except (RemoteDisconnected, URLError): + return jsonify({}) -- cgit v1.2.3