From abc0d36f39c691652fee81bce808d625fc368e72 Mon Sep 17 00:00:00 2001 From: Arun Isaac Date: Fri, 19 Nov 2021 17:16:07 +0530 Subject: Replace guix environment with guix shell. * README.md, guix.scm: Replace guix environment with guix shell. --- README.md | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) (limited to 'README.md') diff --git a/README.md b/README.md index 84e5fb9..62e8aeb 100644 --- a/README.md +++ b/README.md @@ -9,8 +9,8 @@ Install GNU Guix - this can be done on every running Linux system. There are at least three ways to start GeneNetwork3 with GNU Guix: -1. Create an environment with `guix environment` -2. Create a container with `guix environment -C` +1. Create an environment with `guix shell` +2. Create a container with `guix shell -C` 3. Use a profile and shell settings with `source ~/opt/genenetwork3/etc/profile` #### Create an environment: @@ -18,13 +18,13 @@ There are at least three ways to start GeneNetwork3 with GNU Guix: Simply load up the environment (for development purposes): ```bash -guix environment --load=guix.scm +guix shell -Df guix.scm ``` Also, make sure you have the [guix-bioinformatics](https://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics) channel set up. ```bash -guix environment --expose=$HOME/genotype_files/ --load=guix.scm +guix shell --expose=$HOME/genotype_files/ -Df guix.scm python3 import redis ``` @@ -32,7 +32,7 @@ python3 #### Run a Guix container ``` -guix environment -C --network --expose=$HOME/genotype_files/ --load=guix.scm +guix shell -C --network --expose=$HOME/genotype_files/ -Df guix.scm ``` -- cgit v1.2.3