From d0d996f4d963de9e033b622a1e51385cb1be0886 Mon Sep 17 00:00:00 2001 From: zsloan Date: Mon, 7 Aug 2023 20:23:25 +0000 Subject: Fix query for retrieving mrna dataset group name --- gn3/db/datasets.py | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/gn3/db/datasets.py b/gn3/db/datasets.py index 38819db..0c0fab4 100644 --- a/gn3/db/datasets.py +++ b/gn3/db/datasets.py @@ -44,11 +44,11 @@ def retrieve_mrna_group_name(connection: Any, probeset_id: int): of the group the dataset belongs to. """ query = ( - "SELECT is.Name " - "FROM ProbeSet ps LEFT JOIN ProbeSetXRef psx ON px.ProbeSetId = ps.Id " - "INNER JOIN ProbeSetFreeze psf ON psx.ProbeSetFreezeId = psf.Id " - "INNER JOIN ProbeFreeze pf ON psf.ProbeFreezeId = ProbeFreeze.Id " - "INNER JOIN InbredSet is ON pf.InbredSetId = is.Id " + "SELECT iset.Name " + "FROM ProbeSet ps LEFT JOIN ProbeSetXRef psx ON psx.ProbeSetId = ps.Id " + "LEFT JOIN ProbeSetFreeze psf ON psx.ProbeSetFreezeId = psf.Id " + "LEFT JOIN ProbeFreeze pf ON psf.ProbeFreezeId = pf.Id " + "LEFT JOIN InbredSet iset ON pf.InbredSetId = iset.Id " "WHERE ps.Id = %(probeset_id)s") with connection.cursor() as cursor: cursor.execute(query, {"probeset_id": probeset_id}) -- cgit 1.4.1