index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2021-03-31
add datasets functions and endpoints
Alexander Kabui
2021-03-30
refactor retrieve trait sample data and tests
Alexander Kabui
2021-03-30
modify getting sample data from db
Alexander Kabui
2021-03-30
initial commit for creating dataset
Alexander Kabui
2021-03-30
initial commit for creating trait and datasets
Alexander Kabui
2021-03-23
Convert Path object to a str
BonfaceKilz
2021-03-23
Add function to cache ipfs files
BonfaceKilz
2021-03-23
Apply autopep-8
BonfaceKilz
2021-03-16
delete unwanted correlation stuff (#5)
Alexander Kabui
2021-03-16
Refactor/clean up correlations (#4)
Alexander Kabui
2021-03-13
Correlation api (#2)
Alexander Kabui
2021-03-10
Fix k-compute command when "loco" is true
BonfaceKilz
2021-03-10
Update test to ensure redis.hset is called correctly
BonfaceKilz
2021-03-10
Apply yapf file formatting to file
BonfaceKilz
2021-03-10
Add extra tests for file utils
BonfaceKilz
2021-03-10
Run yapf-formatter against file
BonfaceKilz
2021-03-08
Delete "generate_gemma_computation_cmd"
BonfaceKilz
2021-03-08
Replace "compute_k_values" with "generate_gemma_cmd"
BonfaceKilz
2021-03-08
Add generic fn for computing k and gwa values
BonfaceKilz
2021-03-08
Apply pep-8 formatting
BonfaceKilz
2021-03-08
bug: Put a space between gemma-wrapper args
BonfaceKilz
2021-03-08
Delete "lookup_file" procedure
BonfaceKilz
2021-03-08
Extract files to "/TMPDIR/TOKEN"
BonfaceKilz
2021-03-08
Fix failing tests
BonfaceKilz
2021-03-08
Make the name of the redis job queue configurable
BonfaceKilz
2021-02-24
Create a new helper function for generating k_values and GWA
BonfaceKilz
2021-02-24
Add new procedure that computes the hash of an array of strings
BonfaceKilz
2021-02-24
Create a new method for generating a valid phenotype file on the fly
BonfaceKilz
2021-02-24
Update "compose_gemma_cmd" tests
BonfaceKilz
2021-02-16
Add procedure for uploading gzipped file
BonfaceKilz
2021-02-16
Add extra option to set email when queueing CMD
BonfaceKilz
2021-02-16
Add new test cases for run_cmd
BonfaceKilz
2021-02-12
Use sorted list of files when calculating md5sums of directory
BonfaceKilz
2021-02-12
Add new procedure for queueing a command
BonfaceKilz
2021-02-12
Add new procedure for composing a gemma cmd
BonfaceKilz
2021-02-12
Add new procedure to return a python dict from a json file
BonfaceKilz
2021-02-12
Add new procedure for looking up files in a given ENV variable
BonfaceKilz
2021-02-12
Add function for computing the hash of a directory
BonfaceKilz