index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
about
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
tests
/
integration
Age
Commit message (
Expand
)
Author
2021-05-02
delete dataset and trait files
Alexander Kabui
2021-04-12
fix merge conflict
Alexander Kabui
2021-04-12
Integrate correlation API
Alexander Kabui
2021-04-06
add mock db for tests
Alexander Kabui
2021-04-06
fix Docstrings
Alexander Kabui
2021-04-06
delete unnecessary functions and comments
Alexander Kabui
2021-04-05
fix for fetching dataset traits data
Alexander Kabui
2021-04-04
refactor code for trait data
Alexander Kabui
2021-03-31
add fetch dataset strain id,strain name and unittests
Alexander Kabui
2021-03-31
add temp_db setup and integration tests
Alexander Kabui
2021-03-30
initial commit for creating trait and datasets
Alexander Kabui
2021-03-23
Use ipfs to get genotype files
BonfaceKilz
2021-03-16
delete unwanted correlation stuff (#5)
Alexander Kabui
2021-03-16
Refactor/clean up correlations (#4)
Alexander Kabui
2021-03-15
Apply pep-8 formatting
BonfaceKilz
2021-03-13
Correlation api (#2)
Alexander Kabui
2021-03-10
Add missing "/" in URL in docstring
BonfaceKilz
2021-03-10
Rename "covariates" to "covars" in endpoints for consistency
BonfaceKilz
2021-03-10
Fix k-compute command when "loco" is true
BonfaceKilz
2021-03-08
Remove "/k-gwa-computation"
BonfaceKilz
2021-03-08
Add "/k-gwa-compute/covars/loco/<chromosomes>/maf/<maf>/<token>"
BonfaceKilz
2021-03-08
Add "/gemma/k-gwa-compute/loco/<chromosomes>/maf/<maf>/<token>"
BonfaceKilz
2021-03-08
Add "/k-gwa-compute/covars/<token>"
BonfaceKilz
2021-03-08
Add "/gemma/k-gwa-compute/<token>"
BonfaceKilz
2021-03-08
Replace "compute_k_values" with "generate_gemma_cmd"
BonfaceKilz
2021-03-08
Add generic fn for computing k and gwa values
BonfaceKilz
2021-03-08
Apply pep-8 formatting
BonfaceKilz
2021-03-08
Add new endpoint
BonfaceKilz
2021-03-08
Replace "generate_gemma_computation_cmd" with "compose_gemma_cmd"
BonfaceKilz
2021-03-08
Add new endpoint: "/gwa-compute/<k_filename>/loco/maf/<maf>/<token>"
BonfaceKilz
2021-03-08
Add new endpoint: "/gwa-compute/covars/<k_filename>/<token>"
BonfaceKilz
2021-03-08
Add new endpoint: "/gwa-compute/<k_filename>/<token>"
BonfaceKilz
2021-03-08
Add new endpoint: "/gemma/k-compute/loco/<chromosomes>/<token>"
BonfaceKilz
2021-03-08
Prepend all endpoints with "api"
BonfaceKilz
2021-03-08
Add new endpoint: "/gemma/k-compute/<token>"
BonfaceKilz
2021-03-08
Replace APP_DEFAULTS dict with actual conf params
BonfaceKilz
2021-03-08
Update failing tests.
BonfaceKilz
2021-03-08
Fix failing tests
BonfaceKilz
2021-03-08
Add dummy test data files
BonfaceKilz
2021-03-08
Add extra endpoint for checking the status of a command
BonfaceKilz
2021-03-08
Make the name of the redis job queue configurable
BonfaceKilz
2021-02-24
Rename "/gemma/run" to "/gemma/k-gwa-computation"
BonfaceKilz
2021-02-24
Add tests for "/gemma/run" endpoint
BonfaceKilz
2021-02-24
Add integration test for "/gemma/version" endpoint
BonfaceKilz
2021-02-16
Add test cases for "/metadata/upload" endpoint
BonfaceKilz
2021-02-16
Add basic integration tests to test out the API
BonfaceKilz