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path: root/gn3/db/datasets.py
AgeCommit message (Expand)Author
2024-02-13Retrieve metadata from text files given a path.Munyoki Kilyungi
2023-08-17Fix queries for fetching group nameszsloan
2023-08-17Fix query for retrieving mrna dataset group namezsloan
2023-08-17Fix mrna group name queryzsloan
2023-08-17Add function for retrieving mRNA Assay group namezsloan
2023-07-18Bug: Fetch group name by dataset_idFrederick Muriuki Muriithi
2023-07-12Bug: Retrieve configs from app, not environmentFrederick Muriuki Muriithi
2023-05-22Use string literal concatenation to make genofile_path line shorterzsloan
2023-05-22Fix quotes when setting genofile_pathzsloan
2023-05-22Change type from 'any' to 'Any'zsloan
2023-05-22Use f-string for setting genofile_pathzsloan
2023-05-22Include encoding in open statement to address pylint W1514zsloan
2023-05-22Initialize 'line'; previous pylint complained because line might not be initi...zsloan
2023-05-22Use 'with open()' syntaxzsloan
2023-05-22Fix retrieve_sample_list function to correctly get genofile_pathzsloan
2023-05-22Add function for retrieving group name (given group ID)zsloan
2023-05-22Add function for retrieving samplelist from .geno filezsloan
2022-11-02Re-implement RDF related code to use monads in its own moduleMunyoki Kilyungi
2022-06-21db: datasets.py: Ignore results from sparql.queryAndConvertBonfaceKilz
2022-02-21Fix a myriad of linter issuesFrederick Muriuki Muriithi
2022-02-18Remove code trying to query non-existent `TempFreeze` tableFrederick Muriuki Muriithi
2021-12-23db: Assist mypy with explicit type declaration.Arun Isaac
2021-12-23db: Fix sparql_query return type.Arun Isaac
2021-12-23db: Fix wrong continued indentation.Arun Isaac
2021-12-09Prevent error on no result. Fix indexingFrederick Muriuki Muriithi
2021-12-02Implement dataset metadata API endpoint.Arun Isaac
2021-09-27Update terminology: `riset` to `group`Frederick Muriuki Muriithi
2021-08-17Fix errors: add in missing parenthesisMuriithi Frederick Muriuki
2021-08-09Fix linting errorsMuriithi Frederick Muriuki
2021-08-05Reorganise the database codeMuriithi Frederick Muriuki