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AgeCommit message (Expand)Author
2021-12-17Add "success" status to final computation resultsFrederick Muriuki Muriithi
2021-12-14linting: Fix obvious linting issuesFrederick Muriuki Muriithi
2021-12-14mypy: ignore some imports and errorsFrederick Muriuki Muriithi
2021-12-14Adds type hint for normalize_values functionjgart
2021-12-14TO REVERT: Add logging to see data frameFrederick Muriuki Muriithi
2021-12-14Remove any items with less than 3 samplesFrederick Muriuki Muriithi
2021-12-14Fix dataset: use target dataset not primaryFrederick Muriuki Muriithi
2021-12-13Provide missing functionFrederick Muriuki Muriithi
2021-12-13Fix the removal of controls for corresponding Nones in targetsFrederick Muriuki Muriithi
2021-12-13Return the primary and control traits in addition to resultsFrederick Muriuki Muriithi
2021-12-13Run partial correlations against chosen databaseFrederick Muriuki Muriithi
2021-12-10format normalize function doc stringAlexander Kabui
2021-12-10minor pr fixesAlexander Kabui
2021-12-10rename variablesAlexander Kabui
2021-12-10try and catch for non matching sample keysAlexander Kabui
2021-12-10update function docs for normalizing strain valuesAlexander Kabui
2021-12-10fix bug:unpacking error when generator returns empty listAlexander Kabui
2021-12-09Prevent error on no result. Fix indexingFrederick Muriuki Muriithi
2021-12-08Provide group from primary traitFrederick Muriuki Muriithi
2021-11-29Fix linting errorsFrederick Muriuki Muriithi
2021-11-29Provide entry-point function for the partial correlationsFrederick Muriuki Muriithi
2021-11-23Fix a myriad of linting errorsFrederick Muriuki Muriithi
2021-11-23Migrate `getPartialCorrelationsNormal`Frederick Muriuki Muriithi
2021-11-19Avoid rounding: compare floats approximatelyFrederick Muriuki Muriithi
2021-11-18Fix some linting errorsFrederick Muriuki Muriithi
2021-11-18Replace code migrated from R with pingouin functionsFrederick Muriuki Muriithi
2021-11-15Fix bugs in recursive partial correlationsFrederick Muriuki Muriithi
2021-11-15Fix the columns in built data frameFrederick Muriuki Muriithi
2021-11-12Merge branch 'main' of github.com:genenetwork/genenetwork3 into partial-corre...Frederick Muriuki Muriithi
2021-11-11Reimplement correlations2.compute_correlation using pearsonr.Arun Isaac
2021-11-11Reimplement __items_with_values using list comprehension.Arun Isaac
2021-11-11pylint fixes and pep8 formattingAlexander Kabui
2021-11-11fix target and base sample data orderAlexander Kabui
2021-11-11fix:spawned processes memory issuesAlexander Kabui
2021-11-11replace list with generatorsAlexander Kabui
2021-11-09Implement remaining part of `partial_correlation_recursive` functionFrederick Muriuki Muriithi
2021-11-09Fix bug: if three columns, ensure last is "z"Frederick Muriuki Muriithi
2021-11-04Create blackbox tests for some functions migrated from RFrederick Muriuki Muriithi
2021-11-04Stub `determine_partials`Frederick Muriuki Muriithi
2021-11-04Implement `compute_partial_correlations_fast`Frederick Muriuki Muriithi
2021-11-04Retrieve indices of the selected samplesFrederick Muriuki Muriithi
2021-11-04Explicitly round the valuesFrederick Muriuki Muriithi
2021-11-04Specify ten (10) decimal placesFrederick Muriuki Muriithi
2021-11-04Fix linting and typing errorsFrederick Muriuki Muriithi
2021-11-04Complete `build_temporary_tissue_correlations_table`Frederick Muriuki Muriithi
2021-11-04Complete implementation of `batch_computed_tissue_correlation`Frederick Muriuki Muriithi
2021-11-04Move `correlations_of_all_tissue_traits`Frederick Muriuki Muriithi
2021-11-04Implement `tissue_correlation` functionFrederick Muriuki Muriithi
2021-11-04Move the function to computations moduleFrederick Muriuki Muriithi
2021-11-04Move the partial_correlations module to gn3.computationsFrederick Muriuki Muriithi
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